RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 H2AFJQ9BTM1 129 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 MVB12BQ9H7P6 319 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 CSNK1G3Q9Y6M4 447 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 B4DGG1 531 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 STX16-NPEPL1H3BU86 382 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 STX16O14662 325 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 TRIM13O60858 407 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 SLC16A8O95907 504 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 RPN2P04844 631 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 RETP07949 1114 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 ANXA5P08758 320 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 IMPA1P29218 277 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 DNAJB13P59910 316 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 UBE2IP63279 158 aaKnown RBP20.9■□□□□ 0.94
TPM1-204ENST00000334895 PDK4Q16654 411 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 SULT1C3Q6IMI6 304 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 IL27RAQ6UWB1 636 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 SLC22A9Q8IVM8 553 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 LMNTD1Q8N9Z9 388 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 SAP25Q8TEE9 199 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 DYDC1Q8WWB3 177 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 RAD51AP1Q96B01 352 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 FBXL8Q96CD0 374 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 CCDC138Q96M89 665 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 CAMK1GQ96NX5 476 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 GATA5Q9BWX5 397 aaPredicted RBP20.9■□□□□ 0.94
TPM1-204ENST00000334895 STOX2Q9P2F5 926 aaPredicted RBP20.9■□□□□ 0.94
TPM1-204ENST00000334895 TMCO1Q9UM00 188 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 DOLKQ9UPQ8 538 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 TDRKHQ9Y2W6 561 aaKnown RBP20.9■□□□□ 0.94
TPM1-204ENST00000334895 HEBP2Q9Y5Z4 205 aa20.9■□□□□ 0.94
TPM1-204ENST00000334895 ARID1BQ8NFD5 2236 aaPredicted RBP20.9■□□□□ 0.94
TPM1-204ENST00000334895 KIR2DS5A0A0G2JLQ3 304 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 A0A0G2JNG1 304 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 KIR2DS3K7RE56 304 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 NOBOXO60393 691 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 S100BP04271 92 aaPredicted RBP20.89■□□□□ 0.94
TPM1-204ENST00000334895 ANXA6P08133 673 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 XRCC1P18887 633 aaPredicted RBP20.89■□□□□ 0.94
TPM1-204ENST00000334895 KIR2DS5Q14953 304 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 CHI3L2Q15782 390 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 GATAD2AQ86YP4 633 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 MAGEC3Q8TD91 643 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 UBTD2Q8WUN7 234 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 CXorf40BQ96DE9 158 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 FAM122AQ96E09 287 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 CCDC126Q96EE4 140 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 L3HYPDHQ96EM0 354 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 IL17FQ96PD4 163 aa20.89■□□□□ 0.94
TPM1-204ENST00000334895 OR5K4A6NMS3 321 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 GFRA3O60609 400 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 SYPP08247 313 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 ENGP17813 658 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 IMPDH1P20839 514 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 ARRB2P32121 409 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 PLA2G5P39877 138 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 NAGLUP54802 743 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 HERVK_113P63132 956 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 SPEM2Q0P670 501 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 ZNF678Q5SXM1 525 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 OGFOD3Q6PK18 319 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 ATG14Q6ZNE5 492 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 RPS27LQ71UM5 84 aaKnown RBP20.89■□□□□ 0.93
TPM1-204ENST00000334895 C17orf82Q86X59 251 aaPredicted RBP20.89■□□□□ 0.93
TPM1-204ENST00000334895 ZNF480Q8WV37 535 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 ERVK-6Q9BXR3 956 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 NUSAP1Q9BXS6 441 aaKnown RBP20.89■□□□□ 0.93
TPM1-204ENST00000334895 SLC40A1Q9NP59 571 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 CPNE7Q9UBL6 633 aa20.89■□□□□ 0.93
TPM1-204ENST00000334895 KHNYNO15037 678 aaKnown RBP20.88■□□□□ 0.93
TPM1-204ENST00000334895 DFNA5O60443 496 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 RPS17P08708 135 aaKnown RBP20.88■□□□□ 0.93
TPM1-204ENST00000334895 ERGP11308 486 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 EEF1DP29692 281 aaKnown RBP20.88■□□□□ 0.93
TPM1-204ENST00000334895 GGT5P36269 586 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 SLC6A12P48065 614 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 HSPA7P48741 367 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 MAZP56270 477 aaKnown RBP20.88■□□□□ 0.93
TPM1-204ENST00000334895 UNC50Q53HI1 259 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 TTC23LQ6PF05 361 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 AGTRAPQ6RW13 159 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 LRRC56Q8IYG6 542 aaPredicted RBP20.88■□□□□ 0.93
TPM1-204ENST00000334895 OR52E1Q8NGJ3 308 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 ZNF75CPQ92670 426 aaPredicted RBP20.88■□□□□ 0.93
TPM1-204ENST00000334895 MAGEB18Q96M61 343 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 C1QTNF3Q9BXJ4 246 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 ATG10Q9H0Y0 220 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 KIR3DX1Q9H7L2 352 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 POT1Q9NUX5 634 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 WWOXQ9NZC7 414 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 POLG2Q9UHN1 485 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 COLEC10Q9Y6Z7 277 aa20.88■□□□□ 0.93
TPM1-204ENST00000334895 PABPN1LA6NDY0 278 aaKnown RBP20.87■□□□□ 0.93
TPM1-204ENST00000334895 CER1O95813 267 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 SLC2A4P14672 509 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 NDUFS1P28331 727 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 GDF5P43026 501 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 CCR10P46092 362 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 HNMTP50135 292 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 CCT8P50990 548 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms