RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 DEFA3P59666 94 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 ARHGEF6Q15052 776 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 ZNF181Q2M3W8 571 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 SPANXN4Q5MJ08 99 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 LACC1Q8IV20 430 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 ZDHHC21Q8IVQ6 265 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 NETO1Q8TDF5 533 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 RHBDF1Q96CC6 855 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 CDKN2AIPNLQ96HQ2 116 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 ATP13A1Q9HD20 1204 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 EIF3LQ9Y262 564 aaKnown RBP13.45□□□□□ -0.26
SYNE3-201ENST00000334258 EYSQ5T1H1 3165 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 MANSC4A6NHS7 340 aaPredicted RBP13.44□□□□□ -0.26
SYNE3-201ENST00000334258 AGAP5A6NIR3 686 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 E5RI56 91 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 NIPSNAP2O75323 286 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 VPS26AO75436 327 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 F2P00734 622 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 MMP2P08253 660 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 PGFP49763 221 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 IL2P60568 153 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 ZNF235Q14590 738 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 C18orf21Q32NC0 220 aaPredicted RBP13.44□□□□□ -0.26
SYNE3-201ENST00000334258 CES5AQ6NT32 575 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 P3H2Q8IVL5 708 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 NKAPQ8N5F7 415 aaKnown RBP13.44□□□□□ -0.26
SYNE3-201ENST00000334258 TTC29Q8NA56 475 aaPredicted RBP13.44□□□□□ -0.26
SYNE3-201ENST00000334258 SPERTQ8NA61 448 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 EEF1AKMT1Q8WVE0 214 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 OR52E6Q96RD3 313 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 POPDC3Q9HBV1 291 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 TRMT13Q9NUP7 481 aaKnown RBP13.44□□□□□ -0.26
SYNE3-201ENST00000334258 TBC1D14Q9P2M4 693 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 OPTCQ9UBM4 332 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 RRN3P2A6NIE6 340 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 M0QX08 132 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 STX16O14662 325 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 MED26O95402 600 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 ATXN1LP0C7T5 689 aaKnown RBP13.44□□□□□ -0.26
SYNE3-201ENST00000334258 CLK3P49761 638 aaKnown RBP13.44□□□□□ -0.26
SYNE3-201ENST00000334258 SUOXP51687 545 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 UBE2Q1Q7Z7E8 422 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 SCN4BQ8IWT1 228 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 TMEM86AQ8N2M4 240 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 ESX1Q8N693 406 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 CCDC115Q96NT0 180 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 PAAF1Q9BRP4 392 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 ZBED2Q9BTP6 218 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 ABCC13Q9NSE7 274 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 ZNF221Q9UK13 617 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 ENPP1P22413 925 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 MLLT6P55198 1093 aaPredicted RBP13.44□□□□□ -0.26
SYNE3-201ENST00000334258 CDC42EP1Q00587 391 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 ABRAXAS2Q15018 415 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 UBXN11Q5T124 520 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 CELF2-AS1Q8N7Q2 184 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 OR4K2Q8NGD2 314 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 BRSK1Q8TDC3 778 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 GTF2H4Q92759 462 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 PYCR2Q96C36 320 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 YME1L1Q96TA2 773 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 TRIM62Q9BVG3 475 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 CCNB1IP1Q9NPC3 277 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 HEBP1Q9NRV9 189 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 DCAF13Q9NV06 445 aaKnown RBP13.44□□□□□ -0.26
SYNE3-201ENST00000334258 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 PDP1Q9P0J1 537 aaPredicted RBP13.44□□□□□ -0.26
SYNE3-201ENST00000334258 OSGIN1Q9UJX0 560 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 ANGPTL3Q9Y5C1 460 aa13.44□□□□□ -0.26
SYNE3-201ENST00000334258 ZSCAN5BA6NJL1 495 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 hCG_2039718K7EN88 272 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 GUCA1CO95843 209 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 PEX11BO96011 259 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 TUBA1BP68363 451 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 HMGCS1Q01581 520 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 ALFQ53S48 1182 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 GDF6Q6KF10 455 aaPredicted RBP13.43□□□□□ -0.26
SYNE3-201ENST00000334258 TUBA1AQ71U36 451 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 ANKRD46Q86W74 232 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 METTL4Q8N3J2 472 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 OR4F6Q8NGB9 312 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 GTF3C2Q8WUA4 911 aaPredicted RBP13.43□□□□□ -0.26
SYNE3-201ENST00000334258 NUAK2Q9H093 628 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 VNN3Q9NY84 501 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 LRRC37A2A6NM11 1700 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 C17orf102A2RUQ5 167 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 E2F3O00716 465 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 FKBP9O95302 570 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 OGNP20774 298 aaKnown RBP13.43□□□□□ -0.26
SYNE3-201ENST00000334258 EPHA2P29317 976 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 CDKN1CP49918 316 aaPredicted RBP13.43□□□□□ -0.26
SYNE3-201ENST00000334258 HK3P52790 923 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 MANEALQ5VSG8 457 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 LAIR1Q6GTX8 287 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 SIGIRRQ6IA17 410 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 FKBP9P1Q75LS8 142 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 HORMAD1Q86X24 394 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 KRTCAP2Q8N6L1 136 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 DTX3Q8N9I9 347 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 OR7G1Q8NGA0 311 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms