RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SMAD4Q13485 552 aaKnown RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 CEBPEQ15744 281 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 MOGQ16653 247 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 TMEM201Q5SNT2 666 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 TMEM215Q68D42 235 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 PRMT9Q6P2P2 845 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 SLC15A4Q8N697 577 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 RNF148Q8N7C7 305 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 HOXB13Q92826 284 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 ALG9Q9H6U8 611 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 A0A0B4J293 547 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 FUOMA2VDF0 154 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 IFRD1O00458 451 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 ABCB7O75027 752 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 KCNK2O95069 426 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 SOD2P04179 222 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 PTPN2P17706 415 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 AGXTP21549 392 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 OCA2Q04671 838 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 IFRD2Q12894 506 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 PWP1Q13610 501 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 FHL1Q13642 323 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 UGT8Q16880 541 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 LRRC36Q1X8D7 754 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 TTC23LQ6PF05 361 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 IGFN1Q86VF2 1251 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 CIR1Q86X95 450 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 HS3ST5Q8IZT8 346 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 ARHGEF39Q8N4T4 335 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 ZNF775Q96BV0 537 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 RNF31Q96EP0 1072 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 SERPINB11Q96P15 392 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 WFDC6Q9BQY6 131 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 MAGEH1Q9H213 219 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 FTSJ1Q9UET6 329 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 BTRCQ9Y297 605 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 DLGAP4Q9Y2H0 992 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 PADI2Q9Y2J8 665 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 SF3B6Q9Y3B4 125 aaKnown RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 PCDHB14Q9Y5E9 798 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 ILVBLA1L0T0 632 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 GRXCR1A8MXD5 290 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 EIF3FO00303 357 aaPredicted RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 INSIG1O15503 277 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 SMIM24O75264 130 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 BCAS1O75363 584 aaPredicted RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ETHE1O95571 254 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ODC1P11926 461 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 KCNQ1P51787 676 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 MAXP61244 160 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 RELAQ04206 551 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CD47Q08722 323 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 RBM48Q5RL73 367 aaKnown RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ATG9BQ674R7 924 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CCDC149Q6ZUS6 474 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CATSPER4Q7RTX7 472 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 HS6ST3Q8IZP7 471 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 B4GALNT2Q8NHY0 566 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 C2orf15Q8WU43 125 aaKnown RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 C17orf80Q9BSJ5 609 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 TCHPQ9BT92 498 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 SEMA6AQ9H2E6 1030 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ATP13A3Q9H7F0 1226 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 IL26Q9NPH9 171 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 RBM22Q9NW64 420 aaKnown RBP eCLIP7.63□□□□□ -1.191e-7■■■■■ 31.6
CNOT4-201ENST00000315544 FBXL12Q9NXK8 326 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 GALNT8Q9NY28 637 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CFAP20Q9Y6A4 193 aaKnown RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 HSPE1-MOB4S4R3N1 261 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 A3GALT2U3KPV4 340 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 DHRS12A0PJE2 317 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ANKRD66B4E2M5 251 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 MRASO14807 208 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 COCHO43405 550 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CSPG5O95196 566 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CA3P07451 260 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 G6PDP11413 515 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CRISP3P54108 245 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CDK5R2Q13319 367 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CAPRIN1Q14444 709 aaKnown RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 PON2Q15165 354 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 TSNQ15631 228 aaKnown RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 NRF1Q16656 503 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 TMTC4Q5T4D3 741 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 C1QTNF12Q5T7M4 302 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ANKRD54Q6NXT1 300 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 TRILQ7L0X0 811 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 MRPL43Q8N983 215 aaKnown RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ICA1LQ8NDH6 482 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 FBXO22Q8NEZ5 403 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 OR4L1Q8NH43 312 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 NETO1Q8TDF5 533 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ATXN7L3BQ96GX2 97 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 BOCQ9BWV1 1114 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 VCXQ9H320 206 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 NSUN3Q9H649 340 aaKnown RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 IL1RAPQ9NPH3 570 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 MRPS18AQ9NVS2 196 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms