RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.34□□□□□ -0.59
SMIM4-201ENST00000307106 OR2A14Q96R47 310 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 FOXC2Q99958 501 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 CRB3Q9BUF7 120 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 CXXC4Q9H2H0 198 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 MVB12BQ9H7P6 319 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 CTSFQ9UBX1 484 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 IP6K2Q9UHH9 426 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 ICKQ9UPZ9 632 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 ZNF835Q9Y2P0 537 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 PKP3Q9Y446 797 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 FLNAP21333 2647 aaKnown RBP11.34□□□□□ -0.59
SMIM4-201ENST00000307106 LGALS16A8MUM7 142 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 DSCR3O14972 297 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 SGTAO43765 313 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 PRAMEF2O60811 474 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 PRAMEF1O95521 474 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 PRR35P0CG20 571 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 FDXRP22570 491 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 HADHQ16836 314 aaKnown RBP11.33□□□□□ -0.6
SMIM4-201ENST00000307106 Q6ZPB1 254 aaPredicted RBP11.33□□□□□ -0.6
SMIM4-201ENST00000307106 ZNF571Q7Z3V5 609 aaPredicted RBP11.33□□□□□ -0.6
SMIM4-201ENST00000307106 GLT6D1Q7Z4J2 308 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 SPPL2CQ8IUH8 684 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 KCTD6Q8NC69 237 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 FLVCR1-AS1Q8TAF5 88 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 ENOX1Q8TC92 643 aaKnown RBP11.33□□□□□ -0.6
SMIM4-201ENST00000307106 BLOC1S5Q8TDH9 187 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 NANOS1Q8WY41 292 aaKnown RBP11.33□□□□□ -0.6
SMIM4-201ENST00000307106 NRGNQ92686 78 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 C8orf44Q96CB5 159 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 ERGIC2Q96RQ1 377 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 OR52A5Q9H2C5 316 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 HAUS4Q9H6D7 363 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 COG4Q9H9E3 785 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 SPHK1Q9NYA1 384 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 EURLQ9NYK6 297 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 UBP1Q9NZI7 540 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 ANAPC7Q9UJX3 599 aa11.33□□□□□ -0.6
SMIM4-201ENST00000307106 NSG1A0A0A6YYJ2 146 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 VSTM2BA6NLU5 285 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 DDX3XO00571 662 aaKnown RBP eCLIP11.32□□□□□ -0.65e-7■■□□□ 14
SMIM4-201ENST00000307106 WDPCPO95876 746 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 CHRM5P08912 532 aaPredicted RBP11.32□□□□□ -0.6
SMIM4-201ENST00000307106 MYBL2P10244 700 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 SHMT2P34897 504 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 NSG1P42857 185 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 OR1D4P47884 311 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 CD151P48509 253 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 CARSP49589 748 aaKnown RBP11.32□□□□□ -0.6
SMIM4-201ENST00000307106 PRLHRP49683 370 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 FANCCQ00597 558 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 CACNG1Q06432 222 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 FOXD4Q12950 439 aaPredicted RBP11.32□□□□□ -0.6
SMIM4-201ENST00000307106 BOP1Q14137 746 aaKnown RBP11.32□□□□□ -0.6
SMIM4-201ENST00000307106 PDK2Q15119 407 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 CT47A1Q5JQC4 288 aaPredicted RBP11.32□□□□□ -0.6
SMIM4-201ENST00000307106 SIRPB2Q5JXA9 342 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 HIBCHQ6NVY1 386 aaPredicted RBP11.32□□□□□ -0.6
SMIM4-201ENST00000307106 UNC5AQ6ZN44 842 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 METTL27Q8N6F8 245 aaPredicted RBP11.32□□□□□ -0.6
SMIM4-201ENST00000307106 THAP3Q8WTV1 239 aaPredicted RBP11.32□□□□□ -0.6
SMIM4-201ENST00000307106 TFGQ92734 400 aaPredicted RBP11.32□□□□□ -0.6
SMIM4-201ENST00000307106 SDCCAG3Q96C92 435 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 FAF2Q96CS3 445 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 RNF32Q9H0A6 362 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 GLOD4Q9HC38 313 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 CUTCQ9NTM9 273 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 HACD3Q9P035 362 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 HEY1Q9Y5J3 304 aa11.32□□□□□ -0.6
SMIM4-201ENST00000307106 HEATR5BQ9P2D3 2071 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 VPS13CQ709C8 3753 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 A0A0A6YYK5 440 aaPredicted RBP11.31□□□□□ -0.6
SMIM4-201ENST00000307106 OR5H15A6NDH6 313 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 FAM227AF5H4B4 570 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 BMP10O95393 424 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 SERPINA7P05543 415 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 RALBP11234 206 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 COX6A1P12074 109 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 CDK11BP21127 795 aaKnown RBP11.31□□□□□ -0.6
SMIM4-201ENST00000307106 PDHA2P29803 388 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 CHRNA4P43681 627 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 RAB28P51157 221 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 UBE2HP62256 183 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 KLC1Q07866 573 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 PTPRCAPQ14761 206 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 TFDP3Q5H9I0 405 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 NDUFAF7Q7L592 441 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 TAOK1Q7L7X3 1001 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 NLRP9Q7RTR0 991 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 MAP7D3Q8IWC1 876 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 SLC25A41Q8N5S1 370 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 DNAAF3Q8N9W5 541 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 PHF10Q8WUB8 498 aaKnown RBP11.31□□□□□ -0.6
SMIM4-201ENST00000307106 DCUN1D1Q96GG9 259 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 GPR137Q96N19 417 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 ZNF559Q9BR84 538 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 REPIN1Q9BWE0 567 aaKnown RBP11.31□□□□□ -0.6
SMIM4-201ENST00000307106 ISCUQ9H1K1 167 aa11.31□□□□□ -0.6
SMIM4-201ENST00000307106 ASB8Q9H765 288 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms