RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 CYP4F3Q08477 520 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SP140Q13342 867 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 USP10Q14694 798 aaKnown RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 EFTUD2Q15029 972 aaKnown RBP eCLIP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ANKS6Q68DC2 871 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PAQR3Q6TCH7 311 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 UBE2R2Q712K3 238 aaPredicted RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PIWIL4Q7Z3Z4 852 aaKnown RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ARHGAP22Q7Z5H3 698 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TAX1BP1Q86VP1 789 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 KMT5CQ86Y97 462 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CARFQ8N187 725 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 NKAPQ8N5F7 415 aaKnown RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 EIF1ADQ8N9N8 165 aaKnown RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MDM1Q8TC05 714 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 EEF1AKMT1Q8WVE0 214 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ZCCHC14Q8WYQ9 949 aaKnown RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MRRFQ96E11 262 aaKnown RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MAP3K3Q99759 626 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 OLFM1Q99784 485 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ZNF768Q9H5H4 540 aaKnown RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 POPDC3Q9HBV1 291 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CIDEBQ9UHD4 219 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 POMT2Q9UKY4 750 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PCDHB11Q9Y5F2 797 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ARHGEF33A8MVX0 844 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 BTN3A3O00478 584 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 DXOO77932 396 aaKnown RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ZBTB11O95625 1053 aaPredicted RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 INHBAP08476 426 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CHRM5P08912 532 aaPredicted RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 HIST1H2AGP0C0S8 130 aaPredicted RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 STMN1P16949 149 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ZNF37AP17032 561 aaPredicted RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ITIH1P19827 911 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 HIST1H2ADP20671 130 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TNFRSF8P28908 595 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PMS2P54278 862 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ERVPABLB-1P60509 514 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TSTA3Q13630 321 aaPredicted RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 KIR2DS3Q14952 304 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TBC1D25Q3MII6 688 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TMTC4Q5T4D3 741 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 IGF2-ASQ6U949 168 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SPESP1Q6UW49 350 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RAPH1Q70E73 1250 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TRMT10CQ7L0Y3 403 aaKnown RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GSPT2Q8IYD1 628 aaKnown RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ADGRF3Q8IZF5 1079 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 OR9A1PQ8NGU1 263 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 OR2L8Q8NGY9 312 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 HIST1H2AHQ96KK5 128 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ZNF578Q96N58 590 aaPredicted RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 IL17FQ96PD4 163 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GPR22Q99680 433 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 HIST1H2AJQ99878 128 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 H2AFJQ9BTM1 129 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TMEM121BQ9BXQ6 578 aaPredicted RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TRIM54Q9BYV2 358 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ACSS3Q9H6R3 686 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 FANCEQ9HB96 536 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GPAMQ9HCL2 828 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 C1GALT1Q9NS00 363 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SLC39A1Q9NY26 324 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MTO1Q9Y2Z2 717 aaKnown RBP10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SPEGQ15772 3267 aa10.65□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 HEATR5BQ9P2D3 2071 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 IGHV5-51A0A0C4DH38 117 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 A0A0J9YY10 115 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 EXOC1LA0A1B0GW35 172 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 B4E171 279 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MYO1CO00159 1063 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC16A5O15375 505 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 KIF1CO43896 1103 aaKnown RBP10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ABHD2P08910 425 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 UGT2B7P16662 529 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PRDX3P30048 256 aaKnown RBP10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 HSD17B2P37059 387 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TSPAN7P41732 249 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PCBP4P57723 403 aaKnown RBP10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TAS2R39P59534 338 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 HSD11B2P80365 405 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TIAL1Q01085 375 aaKnown RBP eCLIP10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FOXM1Q08050 763 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ZNF460Q14592 562 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ARHGAP19Q14CB8 494 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC5A12Q1EHB4 618 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 DCAF12Q5T6F0 453 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CEACAM20Q6UY09 585 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FRA10AC1Q70Z53 315 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SYTL1Q8IYJ3 562 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FBXO15Q8NCQ5 510 aaPredicted RBP10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 UHMK1Q8TAS1 419 aaKnown RBP10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MCOLN3Q8TDD5 553 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ASB11Q8WXH4 323 aa10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 N4BP2L2Q92802 583 aaPredicted RBP10.64□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC46A1Q96NT5 459 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms