RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PABPC1P11940 636 aaKnown RBP17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 BPIP17213 487 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 GSTM4Q03013 218 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 ZNF77Q15935 545 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 PYCR3Q53H96 274 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 XKR7Q5GH72 579 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 ANKS6Q68DC2 871 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 THAP5Q7Z6K1 395 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 SERPINA9Q86WD7 417 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 FBXO39Q8N4B4 442 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 STAG3L4Q8TBR4 150 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 KIAA1191Q96A73 305 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 FBXL8Q96CD0 374 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 TEX37Q96LM6 180 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 TMEM74Q96NL1 305 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 NEURL2Q9BR09 285 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 RAD21L1Q9H4I0 556 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 ASB8Q9H765 288 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 NTN4Q9HB63 628 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 ZIM2Q9NZV7 527 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 SUN2Q9UH99 717 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 RNF112Q9ULX5 631 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 HS3ST2Q9Y278 367 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 PRSS21Q9Y6M0 314 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 C16orf96A6NNT2 1141 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 E5RI56 91 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 ECI2O75521 394 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 MT-ND1P03886 318 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 ALPLP05186 524 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 THRBP10828 461 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 SERPINA4P29622 427 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 SHMT2P34897 504 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 MAGEA10P43363 369 aaPredicted RBP17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 SNRPD1P62314 119 aaKnown RBP17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 CACNG1Q06432 222 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 RAD51Q06609 339 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 SKIV2LQ15477 1246 aaKnown RBP17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 OTUD3Q5T2D3 398 aaPredicted RBP17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 GTF2IRD2BQ6EKJ0 949 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 GTF2IRD2Q86UP8 949 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 ADIPOR2Q86V24 386 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 ADGRG2Q8IZP9 1017 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 HDAC2Q92769 488 aaKnown RBP17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 ZNF707Q96C28 371 aaPredicted RBP17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 LINGO1Q96FE5 620 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 LHPPQ9H008 270 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 SYTL2Q9HCH5 934 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 FAM234BA2RU67 622 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 SYNCRIPO60506 623 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 VPS26AO75436 327 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 CHEK2O96017 543 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 RPS17P08708 135 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 CRHBPP24387 322 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 AGTR2P50052 363 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 UFM1P61960 85 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 CRTC1Q6UUV9 634 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 HID1Q8IV36 788 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 BPIFB6Q8NFQ5 453 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 PHOSPHO2Q8TCD6 241 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 LKAAEAR1Q8TD35 194 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 ISG20Q96AZ6 181 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 DERL2Q9GZP9 239 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 P2RY12Q9H244 342 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 SEMA4BQ9NPR2 832 aaPredicted RBP17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 TRMT6Q9UJA5 497 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 EYSQ5T1H1 3165 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 UPK1AO00322 258 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 B4GAT1O43505 415 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 SNX2O60749 519 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 LHCGRP22888 699 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 ERVK-8P63133 956 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 TCEAL5Q5H9L2 206 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 EGFLAMQ63HQ2 1017 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 GLYATQ6IB77 296 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 TMEM214Q6NUQ4 689 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 TMC5Q6UXY8 1006 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 ZNF366Q8N895 744 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 GPR26Q8NDV2 337 aa17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 FUBP1Q96AE4 644 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 AURKBQ96GD4 344 aaPredicted RBP17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 INTS7Q9NVH2 962 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-201ENST00000284767 SOCS5O75159 536 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 RAP2AP10114 183 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 UROSP10746 265 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 CASP2P42575 452 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 CSNK1DP48730 415 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 MAPK10P53779 464 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 OR4D2P58180 307 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 GABARAPL2P60520 117 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 ECT2LQ008S8 904 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 EPS8Q12929 822 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 NFATC2Q13469 925 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 CHRNA6Q15825 494 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 ZIK1Q3SY52 487 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 TTC23Q5W5X9 447 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 LRRC66Q68CR7 880 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 C8orf59Q8N0T1 100 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 DPP10Q8N608 796 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 TMBIM1Q969X1 311 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 ZNF347Q96SE7 839 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms