RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 KRT6CP48668 564 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 ATXN3P54252 364 aaPredicted RBP16.2■□□□□ 0.18
CCDC40-201ENST00000269318 RPL38P63173 70 aaKnown RBP16.2■□□□□ 0.18
CCDC40-201ENST00000269318 DLX2Q07687 328 aaPredicted RBP16.2■□□□□ 0.18
CCDC40-201ENST00000269318 CCSMST1Q4G0I0 132 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 SLC44A4Q53GD3 710 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 SGO1Q5FBB7 561 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 FAM46CQ5VWP2 391 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 CES5AQ6NT32 575 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 ZNF547Q8IVP9 402 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 SLC15A3Q8IY34 581 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 KLHDC8AQ8IYD2 350 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 CXorf40AQ8TE69 158 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 LINC00615Q96LM1 132 aaPredicted RBP16.2■□□□□ 0.18
CCDC40-201ENST00000269318 TRMT61BQ9BVS5 477 aaKnown RBP16.2■□□□□ 0.18
CCDC40-201ENST00000269318 ACPTQ9BZG2 426 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 ASIC5Q9NY37 505 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 ATXN10Q9UBB4 475 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 LEF1Q9UJU2 399 aaPredicted RBP16.2■□□□□ 0.18
CCDC40-201ENST00000269318 DYTNA2CJ06 578 aa16.19■□□□□ 0.18
CCDC40-201ENST00000269318 CASQ2O14958 399 aaPredicted RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 RSL1D1O76021 490 aaKnown RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 PDYNP01213 254 aa16.19■□□□□ 0.18
CCDC40-201ENST00000269318 PBLDP30039 288 aaPredicted RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 TAS2R38P59533 333 aa16.19■□□□□ 0.18
CCDC40-201ENST00000269318 MAD2L1Q13257 205 aaPredicted RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 CAMK2GQ13555 558 aaPredicted RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 CAPRIN1Q14444 709 aaKnown RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 TIGD2Q4W5G0 525 aa16.19■□□□□ 0.18
CCDC40-201ENST00000269318 AADATQ8N5Z0 425 aa16.19■□□□□ 0.18
CCDC40-201ENST00000269318 RSRC1Q96IZ7 334 aaKnown RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 CCDC138Q96M89 665 aa16.19■□□□□ 0.18
CCDC40-201ENST00000269318 ZNF184Q99676 751 aaPredicted RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 RSPH9Q9H1X1 276 aaPredicted RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 LRTM1Q9HBL6 345 aa16.19■□□□□ 0.18
CCDC40-201ENST00000269318 CMTM6Q9NX76 183 aa16.19■□□□□ 0.18
CCDC40-201ENST00000269318 STOX2Q9P2F5 926 aaPredicted RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 GMPR2Q9P2T1 348 aaKnown RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 PCDHA9Q9Y5H5 950 aa16.19■□□□□ 0.18
CCDC40-201ENST00000269318 XIRP2A4UGR9 3374 aa16.19■□□□□ 0.18
CCDC40-201ENST00000269318 ZFC3H1O60293 1989 aaKnown RBP16.19■□□□□ 0.18
CCDC40-201ENST00000269318 GRXCR2A6NFK2 248 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 LIN7AO14910 233 aaPredicted RBP16.18■□□□□ 0.18
CCDC40-201ENST00000269318 CATP04040 527 aaKnown RBP16.18■□□□□ 0.18
CCDC40-201ENST00000269318 C8BP07358 591 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 BDKRB1P46663 353 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 SOX9P48436 509 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 NFYCQ13952 458 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 KIAA0040Q15053 153 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 C2orf27AQ580R0 203 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 AGBL4Q5VU57 503 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 PQLC1Q8N2U9 271 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 ATL1Q8WXF7 558 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 INTS7Q9NVH2 962 aaKnown RBP16.18■□□□□ 0.18
CCDC40-201ENST00000269318 C6orf203Q9P0P8 240 aaPredicted RBP16.18■□□□□ 0.18
CCDC40-201ENST00000269318 SNX6Q9UNH7 406 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 EIF3LQ9Y262 564 aaKnown RBP16.18■□□□□ 0.18
CCDC40-201ENST00000269318 SZT2Q5T011 3432 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 H3BM21 787 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 MID1O15344 667 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 HSD17B1P14061 328 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 ZNF8P17098 575 aaPredicted RBP16.18■□□□□ 0.18
CCDC40-201ENST00000269318 WASP42768 502 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 CST6Q15828 149 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 IMPG1Q17R60 797 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 AAK1Q2M2I8 961 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 AGTRAPQ6RW13 159 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 NUDT18Q6ZVK8 323 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 TRAPPC5Q8IUR0 188 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 CHPFQ8IZ52 775 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 DPP10Q8N608 796 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 PLA2G15Q8NCC3 412 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 FBXO15Q8NCQ5 510 aaPredicted RBP16.18■□□□□ 0.18
CCDC40-201ENST00000269318 EZH1Q92800 747 aaPredicted RBP16.18■□□□□ 0.18
CCDC40-201ENST00000269318 TMEM125Q96AQ2 219 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 MTFMTQ96DP5 389 aaKnown RBP16.18■□□□□ 0.18
CCDC40-201ENST00000269318 COX14Q96I36 57 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 ZNF514Q96K75 400 aaPredicted RBP16.18■□□□□ 0.18
CCDC40-201ENST00000269318 PKP4Q99569 1192 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 C1orf109Q9NX04 203 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 EPS15L1Q9UBC2 864 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 GPR34Q9UPC5 381 aa16.18■□□□□ 0.18
CCDC40-201ENST00000269318 PRSS51A0A1B0GVH4 220 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 SERTM1A2A2V5 107 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 NPIPB8E9PQR5 432 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 AP1G1O43747 822 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 VEGFDO43915 354 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 UGDHO60701 494 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 PRPH2P23942 346 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 IMPA1P29218 277 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 KIR2DL1P43626 348 aaPredicted RBP16.17■□□□□ 0.18
CCDC40-201ENST00000269318 GALK1P51570 392 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 PTGR1Q14914 329 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 SPATS1Q496A3 300 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 HABP4Q5JVS0 413 aaKnown RBP16.17■□□□□ 0.18
CCDC40-201ENST00000269318 ADAMTSL4Q6UY14 1074 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 THOC6Q86W42 341 aaKnown RBP16.17■□□□□ 0.18
CCDC40-201ENST00000269318 SPATA24Q86W54 205 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 GALNT13Q8IUC8 556 aa16.17■□□□□ 0.18
CCDC40-201ENST00000269318 CFAP206Q8IYR0 622 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms