RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ZNF548Q8NEK5 533 aaPredicted RBP17.66■□□□□ 0.42
COL5A3-201ENST00000264828 TSPAN18Q96SJ8 248 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 COL14A1Q05707 1796 aaKnown RBP17.66■□□□□ 0.42
COL5A3-201ENST00000264828 A0A0G2JN53 185 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 TREHO43280 583 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 REM1O75628 298 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 GRK6P43250 576 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 CLCN4P51793 760 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 CD83Q01151 205 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 IQCCQ4KMZ1 466 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 PRAMEF17Q5VTA0 474 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 SLITRK4Q8IW52 837 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 TMEM203Q969S6 136 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 HTATIP2Q9BUP3 242 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 HPF1Q9NWY4 346 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 DEC1Q9P2X7 70 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 CACNG4Q9UBN1 327 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 CDH7Q9ULB5 785 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 OR51F1A6NGY5 319 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 OR1I1O60431 355 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 ALPPP05187 535 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 PRPS2P11908 318 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 NCBP2P52298 156 aaKnown RBP eCLIP17.66■□□□□ 0.42
COL5A3-201ENST00000264828 GALNT7Q86SF2 657 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 TDRPQ86YL5 185 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 ZSWIM3Q96MP5 696 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 PAK6Q9NQU5 681 aaPredicted RBP17.66■□□□□ 0.42
COL5A3-201ENST00000264828 ZNF358Q9NW07 568 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 MAU2Q9Y6X3 613 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 KNDC1Q76NI1 1749 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 CLDN4O14493 209 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 PDCD5O14737 125 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 SLC35G6P0C7Q6 338 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 SLC13A2Q13183 592 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 TEAD4Q15561 434 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 FOXR2Q6PJQ5 311 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 PIGWQ7Z7B1 504 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 GRHL3Q8TE85 626 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 LCN9Q8WX39 176 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 IRGQQ8WZA9 623 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 DUSP26Q9BV47 211 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 MOV10Q9HCE1 1003 aaKnown RBP17.66■□□□□ 0.42
COL5A3-201ENST00000264828 RGS17Q9UGC6 210 aaPredicted RBP17.66■□□□□ 0.42
COL5A3-201ENST00000264828 TMEM88BA6NKF7 163 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 BTBD19C9JJ37 291 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 VSTM1Q6UX27 236 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 GRPEL2Q8TAA5 225 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 SMPDL3BQ92485 455 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 TUBGCP5Q96RT8 1024 aa17.66■□□□□ 0.42
COL5A3-201ENST00000264828 SLC2A2P11168 524 aaPredicted RBP17.65■□□□□ 0.42
COL5A3-201ENST00000264828 LMO2P25791 158 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 CDH15P55291 814 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 WSCD2Q2TBF2 565 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 KLHL22Q53GT1 634 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 SRFBP1Q8NEF9 429 aaKnown RBP17.65■□□□□ 0.42
COL5A3-201ENST00000264828 CCDC54Q8NEL0 328 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 NUP50Q9UKX7 468 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 TAS2R39P59534 338 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 NOGQ13253 232 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 PCBP2Q15366 365 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL5A3-201ENST00000264828 OR10G2Q8NGC3 310 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 TMEM109Q9BVC6 243 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 OR6C70A6NIJ9 312 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 PRKCGP05129 697 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 MAT2AP31153 395 aaKnown RBP17.65■□□□□ 0.42
COL5A3-201ENST00000264828 NPTX1Q15818 432 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 SYT16Q17RD7 645 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 RBM18Q96H35 190 aaKnown RBP17.65■□□□□ 0.42
COL5A3-201ENST00000264828 DEFB118Q96PH6 123 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 ZNF347Q96SE7 839 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 GPR25O00155 361 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 MAGEA2P43356 314 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 NFKB2Q00653 900 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 PTP4A2Q12974 167 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 PRKD1Q15139 912 aaPredicted RBP17.65■□□□□ 0.42
COL5A3-201ENST00000264828 DGLUCYQ7Z3D6 616 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 CPNE8Q86YQ8 564 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 GPALPP1Q8IXQ4 340 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 OR5AK3PQ8NH89 298 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 CALML5Q9NZT1 146 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 FAM234BA2RU67 622 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 PPM1AP35813 382 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 XKP51811 444 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 HEPACAMQ14CZ8 416 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 CEP68Q76N32 757 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 SLC22A15Q8IZD6 547 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 OR2AJ1Q8NGZ0 328 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 SLC22A4Q9H015 551 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 MED11Q9P086 117 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 AASSQ9UDR5 926 aa17.65■□□□□ 0.42
COL5A3-201ENST00000264828 ZNF282Q9UDV7 671 aaPredicted RBP17.65■□□□□ 0.42
COL5A3-201ENST00000264828 PEX10O60683 326 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 C8GP07360 202 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 GRK5P34947 590 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 ARCN1P48444 511 aaKnown RBP17.64■□□□□ 0.41
COL5A3-201ENST00000264828 FLT3LGP49771 235 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 TAF1AQ15573 450 aaPredicted RBP17.64■□□□□ 0.41
COL5A3-201ENST00000264828 ZNF782Q6ZMW2 699 aaPredicted RBP17.64■□□□□ 0.41
COL5A3-201ENST00000264828 NRSN1Q8IZ57 195 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 GPR151Q8TDV0 419 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms