RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 UTP6Q9NYH9 597 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 FAM50BQ9Y247 325 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 PAK4O96013 591 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ADCY8P40145 1251 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 KDSRQ06136 332 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 MPP3Q13368 585 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 MAPRE1Q15691 268 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 PCID2Q5JVF3 399 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 COX20Q5RI15 118 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 CACUL1Q86Y37 369 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 CHERPQ8IWX8 916 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 LRRC39Q96DD0 335 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 STAMBPL1Q96FJ0 436 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 CCDC114Q96M63 670 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF583Q96ND8 569 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 OR2A5Q96R48 311 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 CSF3RQ99062 836 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 PRDM7Q9NQW5 492 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 SIDT1Q9NXL6 827 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF639Q9UID6 485 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 TIMM22Q9Y584 194 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 CFAP20Q9Y6A4 193 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 AK5Q9Y6K8 562 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 PLCE1Q9P212 2302 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 MYOCOSA0A1B0GUC4 107 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 CD3EAPO15446 510 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 SOCS5O75159 536 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 AOC1P19801 751 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 SLC6A2P23975 617 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 DGKEP52429 567 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 NAGLUP54802 743 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 CCDC89Q8N998 374 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 C7orf26Q96N11 449 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 CIPCQ9C0C6 399 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 APOBEC3BQ9UH17 382 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 RIMS3Q9UJD0 308 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 DSCAMO60469 2012 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 KDM1AO60341 852 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 PRAMEF1O95521 474 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 CPP00450 1065 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 IGKV1D-16P01601 117 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 S100BP04271 92 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 CT62P0C5K7 136 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 VARSP26640 1264 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 MLLT10P55197 1068 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 COG7P83436 770 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 CDK3Q00526 305 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 PRKCQQ04759 706 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 BIRC2Q13490 618 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 PDE7AQ13946 482 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 BCL7AQ4VC05 210 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF805Q5CZA5 627 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 RWDD4Q6NW29 188 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 GSTA5Q7RTV2 222 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 AMIGO1Q86WK6 493 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF354CQ86Y25 554 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 TMIEQ8NEW7 156 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 RPLP0P6Q8NHW5 317 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 RHEBL1Q8TAI7 183 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 PHF10Q8WUB8 498 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 UBTD2Q8WUN7 234 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 SMG7Q92540 1137 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 KCNJ9Q92806 393 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 PEX13Q92968 403 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 WDR77Q9BQA1 342 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 LBHD1Q9BQE6 289 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 WRAP53Q9BUR4 548 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 COL25A1Q9BXS0 654 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 SDR39U1Q9NRG7 319 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 PLAGL1Q9UM63 463 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 RNF11Q9Y3C5 154 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 DOPEY1Q5JWR5 2465 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 PLPP1O14494 284 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 CRCPO75575 148 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 PRPH2P23942 346 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 BSGP35613 385 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 EIF2DP41214 584 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 DNAJB13P59910 316 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 MEF2AQ02078 507 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 HNRNPA0Q13151 305 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 BOP1Q14137 746 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 LRRC8EQ6NSJ5 796 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 TPRG1Q6ZUI0 275 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 B3GNT8Q7Z7M8 397 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 SERPINA9Q86WD7 417 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 TMEFF1Q8IYR6 380 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 EME1Q96AY2 570 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 TTC25Q96NG3 672 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 PKP4Q99569 1192 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 EPAS1Q99814 870 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 MED10Q9BTT4 135 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 RIOK2Q9BVS4 552 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 BBS2Q9BXC9 721 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 CDH19Q9H159 772 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 TRABDQ9H4I3 376 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 RPF2Q9H7B2 306 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 NKIRAS1Q9NYS0 192 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 A0A096LPK6 155 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms