RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 HIST1H2AJQ99878 128 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 H2AFJQ9BTM1 129 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 MENTQ9BUN1 341 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 TRIM54Q9BYV2 358 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 TMEM9BQ9NQ34 198 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 ARL15Q9NXU5 204 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 FAM53CQ9NYF3 392 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 POLG2Q9UHN1 485 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 ZFHX2Q9C0A1 2572 aaPredicted RBP15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 GOLGA4Q13439 2230 aaKnown RBP15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 LY6G6EA0A0G2JKS1 128 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 SYCE1LA8MT33 242 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 SUPT3HB4E1H0 165 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 G3V2L1 256 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 TM9SF1O15321 606 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 GDF9O60383 454 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 SUPT3HO75486 399 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 SLC16A8O95907 504 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 SLC18A1P54219 525 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 AP1S2P56377 157 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 CDKL1Q00532 357 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 ZNF761Q86XN6 746 aaPredicted RBP15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 CCDC63Q8NA47 563 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 OR9A1PQ8NGU1 263 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 APOLD1Q96LR9 279 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 IL17FQ96PD4 163 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 NUDT4Q9NZJ9 180 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 CD274Q9NZQ7 290 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 U3KQA8 63 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 KLK8O60259 260 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 ZWINTO95229 277 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 CD59P13987 128 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 PPP2R2AP63151 447 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 SLC14A1Q13336 389 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 SUZ12Q15022 739 aaKnown RBP15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 ZXDCQ2QGD7 858 aaPredicted RBP15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 FBXO48Q5FWF7 155 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 FAM181AQ8N9Y4 354 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 LMNTD1Q8N9Z9 388 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 PDPRQ8NCN5 879 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 RHBDF1Q96CC6 855 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 CCDC138Q96M89 665 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 EGFL8Q99944 293 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 XKR8Q9H6D3 395 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 MLXIPLQ9NP71 852 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 COPG2Q9UBF2 871 aa15.35■□□□□ 0.05
CCDC90B-201ENST00000260054 PABPN1LA6NDY0 278 aaKnown RBP15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 C4orf47A7E2U8 309 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 FLRT2O43155 660 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 DLX3O60479 287 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 ANXA5P08758 320 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 CPA3P15088 417 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 NR1D1P20393 614 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 IMPA1P29218 277 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 GRK6P43250 576 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 PCLAFQ15004 111 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 PFKFB4Q16877 469 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 C18orf21Q32NC0 220 aaPredicted RBP15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 PROX2Q3B8N5 592 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 ZYG11AQ6WRX3 759 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 TMEM26Q6ZUK4 368 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 RBM12BQ8IXT5 1001 aaKnown RBP15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 AVL9Q8NBF6 648 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 MDM1Q8TC05 714 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 RDH11Q8TC12 318 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 MGARPQ8TDB4 240 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 ZNF480Q8WV37 535 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 ZFPM2Q8WW38 1151 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 STN1Q9H668 368 aaKnown RBP15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 STOX2Q9P2F5 926 aaPredicted RBP15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 PADI4Q9UM07 663 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 ICKQ9UPZ9 632 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 RNF215Q9Y6U7 377 aa15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 ASCC3Q8N3C0 2202 aaKnown RBP15.34■□□□□ 0.05
CCDC90B-201ENST00000260054 RIF1Q5UIP0 2472 aaKnown RBP15.33■□□□□ 0.05
CCDC90B-201ENST00000260054 A8MT66 165 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 TAPBPO15533 448 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 NUDT21O43809 227 aaKnown RBP15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 DHRS4L1P0CG22 281 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 MYL2P10916 166 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 ERGP11308 486 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 GFAPP14136 432 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 KCNA4P22459 653 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 PKLRP30613 574 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 WDR4P57081 412 aaKnown RBP15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 CDKL4Q5MAI5 379 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 FBXO39Q8N4B4 442 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 ESAMQ96AP7 390 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 FBXL8Q96CD0 374 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 PHF21BQ96EK2 531 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 TMEM79Q9BSE2 394 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 MECRQ9BV79 373 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 SPATA7Q9P0W8 599 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 LRIT1Q9P2V4 623 aa15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 PTBP2Q9UKA9 531 aaKnown RBP15.33■□□□□ 0.04
CCDC90B-201ENST00000260054 FOXD2O60548 495 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 SMIM24O75264 130 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 GLB1P16278 677 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 TAC1P20366 129 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 ATP5F1P24539 256 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms