RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 PACSIN3Q9UKS6 424 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 SLC22A14Q9Y267 594 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 FFAR3O14843 346 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 GPR42O15529 346 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 MAP3K7O43318 606 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 CHEK2O96017 543 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 IL9P15248 144 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 SLC6A12P48065 614 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 TFF2Q03403 129 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 TBL3Q12788 808 aaKnown RBP18.41■□□□□ 0.54
TRIM47-201ENST00000254816 CCNIQ14094 377 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 CMPK2Q5EBM0 449 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 PTCRAQ6ISU1 281 aaPredicted RBP18.41■□□□□ 0.54
TRIM47-201ENST00000254816 NEK5Q6P3R8 708 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 HORMAD1Q86X24 394 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 PPFIBP2Q8ND30 876 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 SPDYE1Q8NFV5 336 aaPredicted RBP18.41■□□□□ 0.54
TRIM47-201ENST00000254816 MIEF2Q96C03 454 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 NDE1Q9NXR1 346 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 MMP17Q9ULZ9 603 aa18.41■□□□□ 0.54
TRIM47-201ENST00000254816 AIM2O14862 343 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 HGFP14210 728 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 GLULP15104 373 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 FOSL2P15408 326 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 ACSL1P33121 698 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 IGFALSP35858 605 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 TRIM23P36406 574 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 HNMTP50135 292 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 AP1S2P56377 157 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 PGM2L1Q6PCE3 622 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 IL27RAQ6UWB1 636 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 GK5Q6ZS86 529 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 TCAIMQ8N3R3 496 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 CA14Q9ULX7 337 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 NCKAP1Q9Y2A7 1128 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 MGAT4DA6NG13 374 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 CATP04040 527 aaKnown RBP18.4■□□□□ 0.54
TRIM47-201ENST00000254816 FUCA1P04066 466 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 GABRG2P18507 467 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 HMOX2P30519 316 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 NME5P56597 212 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 FBXO43Q4G163 708 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 LRRTM4Q86VH4 590 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 LMNTD1Q8N9Z9 388 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 HMGB4Q8WW32 186 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 FOPNLQ96NB1 174 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 PKP4Q99569 1192 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 ZNHIT2Q9UHR6 403 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 SCML1Q9UN30 329 aa18.4■□□□□ 0.54
TRIM47-201ENST00000254816 C17orf113A0A1B0GUU1 675 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 SMNDC1O75940 238 aaKnown RBP eCLIP18.39■□□□□ 0.54
TRIM47-201ENST00000254816 C1orf105O95561 183 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 PRDX6P30041 224 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 NUDT2P50583 147 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 PFN3P60673 137 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 SQLEQ14534 574 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 ABRAXAS2Q15018 415 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 XKR7Q5GH72 579 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 OR9I1Q8NGQ6 314 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 HM13Q8TCT9 377 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 SLC26A7Q8TE54 656 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 RTKNQ9BST9 563 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 SLC2A4RGQ9NR83 387 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 FARSBQ9NSD9 589 aaKnown RBP18.39■□□□□ 0.54
TRIM47-201ENST00000254816 CCDC167Q9P0B6 97 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 FZD4Q9ULV1 537 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 PSMD13Q9UNM6 376 aa18.39■□□□□ 0.54
TRIM47-201ENST00000254816 LBPP18428 481 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 TPMTP51580 245 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 CYLC2Q14093 348 aaPredicted RBP18.39■□□□□ 0.53
TRIM47-201ENST00000254816 LRRC70Q7Z2Q7 622 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 EFL1Q7Z2Z2 1120 aaKnown RBP18.39■□□□□ 0.53
TRIM47-201ENST00000254816 KBTBD6Q86V97 674 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 AMZ2Q86W34 360 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 FBXL8Q96CD0 374 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 SLC45A3Q96JT2 553 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 NTMT1Q9BV86 223 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 PREBQ9HCU5 417 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 S100A14Q9HCY8 104 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 STOX2Q9P2F5 926 aaPredicted RBP18.39■□□□□ 0.53
TRIM47-201ENST00000254816 KLQ9UEF7 1012 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 POMPQ9Y244 141 aa18.39■□□□□ 0.53
TRIM47-201ENST00000254816 THRAP10827 490 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 FASTKQ14296 549 aaKnown RBP18.38■□□□□ 0.53
TRIM47-201ENST00000254816 MLF2Q15773 248 aaPredicted RBP18.38■□□□□ 0.53
TRIM47-201ENST00000254816 KIF19Q2TAC6 998 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 AGKQ53H12 422 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 SGO1Q5FBB7 561 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 METTL2BQ6P1Q9 378 aaKnown RBP18.38■□□□□ 0.53
TRIM47-201ENST00000254816 PAOXQ6QHF9 649 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 AGTRAPQ6RW13 159 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 Q6ZSR9 355 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 USP30Q70CQ3 517 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 RP9Q8TA86 221 aaKnown RBP18.38■□□□□ 0.53
TRIM47-201ENST00000254816 MED8Q96G25 268 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 GUCD1Q96NT3 240 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 ZNF184Q99676 751 aaPredicted RBP18.38■□□□□ 0.53
TRIM47-201ENST00000254816 ACTR8Q9H981 624 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 MRPL40Q9NQ50 206 aaKnown RBP18.38■□□□□ 0.53
TRIM47-201ENST00000254816 PHPT1Q9NRX4 125 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms