RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 INPPL1O15357 1258 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 CSNK2A2P19784 350 aaPredicted RBP18.59■□□□□ 0.57
PTPRE-201ENST00000254667 CCNHP51946 323 aaPredicted RBP18.59■□□□□ 0.57
PTPRE-201ENST00000254667 TMEM63BQ5T3F8 832 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 AQP12AQ8IXF9 295 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 OR52J3Q8NH60 311 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 KLK6Q92876 244 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 TMEM138Q9NPI0 162 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 IL7RP16871 459 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 KCTD21Q4G0X4 260 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 CTU1Q7Z7A3 348 aaKnown RBP18.59■□□□□ 0.57
PTPRE-201ENST00000254667 CMTM7Q96FZ5 175 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 GAL3ST4Q96RP7 486 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 COQ7Q99807 217 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 BCL2L14Q9BZR8 327 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 GADD45GO95257 159 aa18.58■□□□□ 0.57
PTPRE-201ENST00000254667 NELFEP18615 380 aaKnown RBP18.58■□□□□ 0.57
PTPRE-201ENST00000254667 FOXN2P32314 431 aa18.58■□□□□ 0.57
PTPRE-201ENST00000254667 MAMDC4Q6UXC1 1216 aa18.58■□□□□ 0.57
PTPRE-201ENST00000254667 C16orf70Q9BSU1 422 aa18.58■□□□□ 0.57
PTPRE-201ENST00000254667 SSNA1O43805 119 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 TNFP01375 233 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 ALPPP05187 535 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 CREB1P16220 341 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 SP140Q13342 867 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 SUZ12Q15022 739 aaKnown RBP18.58■□□□□ 0.56
PTPRE-201ENST00000254667 FRG2Q64ET8 278 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 FRG2BQ96QU4 278 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 TUBGCP5Q96RT8 1024 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 PCYT2Q99447 389 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 HCN3Q9P1Z3 774 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 POMPQ9Y244 141 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 PRKCGP05129 697 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 WDR4P57081 412 aaKnown RBP18.58■□□□□ 0.56
PTPRE-201ENST00000254667 POMZP3Q6PJE2 187 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 TIFABQ6ZNK6 161 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 SNX33Q8WV41 574 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 LRTOMTQ8WZ04 291 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 DERL2Q9GZP9 239 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 A8MUI8 341 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 PSMD11O00231 422 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 GRK6P43250 576 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 SLC9B1Q4ZJI4 515 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 ZCCHC12Q6PEW1 402 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 SERINC5Q86VE9 423 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 CMTM8Q8IZV2 173 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 CAMKVQ8NCB2 501 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 DDX1Q92499 740 aaKnown RBP18.58■□□□□ 0.56
PTPRE-201ENST00000254667 IGSF21Q96ID5 467 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 ELAC1Q9H777 363 aaKnown RBP18.58■□□□□ 0.56
PTPRE-201ENST00000254667 DNAAF2Q9NVR5 837 aaKnown RBP18.58■□□□□ 0.56
PTPRE-201ENST00000254667 SPATA7Q9P0W8 599 aa18.58■□□□□ 0.56
PTPRE-201ENST00000254667 FAM149AA5PLN7 773 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 STX16-NPEPL1H3BU86 382 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 STX16O14662 325 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 SLC30A4O14863 429 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 TYRP14679 529 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 MNDAP41218 407 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 NCBP2P52298 156 aaKnown RBP eCLIP18.57■□□□□ 0.56
PTPRE-201ENST00000254667 SLCO6A1Q86UG4 719 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 PDPRQ8NCN5 879 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 OR5K1Q8NHB7 308 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 CYB5D2Q8WUJ1 264 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 HMGB4Q8WW32 186 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 SAMD11Q96NU1 681 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.57■□□□□ 0.56
PTPRE-201ENST00000254667 LRRC17Q8N6Y2 441 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 TRPV3Q8NET8 790 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 BORCS5Q969J3 196 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 TESMINQ9Y4I5 508 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 TNFRSF21O75509 655 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 ZBTB11O95625 1053 aaPredicted RBP18.57■□□□□ 0.56
PTPRE-201ENST00000254667 CHRNA1P02708 482 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 ALOX5P09917 674 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 PHF11Q9UIL8 331 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 COL2A1P02458 1487 aaPredicted RBP18.57■□□□□ 0.56
PTPRE-201ENST00000254667 AHSGP02765 367 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 SEMG2Q02383 582 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 UPP1Q16831 310 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 PERM1Q5SV97 790 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 C6orf52Q5T4I8 152 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 RNF19BQ6ZMZ0 732 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 GPR65Q8IYL9 337 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 GSDMCQ9BYG8 508 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 DZANK1Q9NVP4 752 aa18.57■□□□□ 0.56
PTPRE-201ENST00000254667 TLX3O43711 291 aaPredicted RBP18.56■□□□□ 0.56
PTPRE-201ENST00000254667 GJA1P17302 382 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 SDC2P34741 201 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 DGKEP52429 567 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 RING1Q06587 406 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 TEAD2Q15562 447 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 BICRALQ6AI39 1079 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 SLC51AQ86UW1 340 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 OR4C6Q8NH72 309 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 CHID1Q9BWS9 393 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 POLE3Q9NRF9 147 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 CXorf49A8MYA2 514 aaPredicted RBP18.56■□□□□ 0.56
PTPRE-201ENST00000254667 LEFTY2O00292 366 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 CLDN7O95471 211 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 ANXA8P13928 327 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms