RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 A0A1W2PPM1 405 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 CPED1A4D0V7 1026 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 NPEPPSL1A6NEC2 478 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 AGPSO00116 658 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 B4GAT1O43505 415 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 KERAO60938 352 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 RFPL3O75679 317 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 UBXN7O94888 489 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 PYGBP11216 843 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 TFEBP19484 476 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 MAP4P27816 1152 aaKnown RBP13.69□□□□□ -0.22
VPS25-201ENST00000253794 GMPRP36959 345 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 CAPZBP47756 277 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 KPNA2P52292 529 aaKnown RBP13.69□□□□□ -0.22
VPS25-201ENST00000253794 E2F1Q01094 437 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 PRKG2Q13237 762 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 BIRC2Q13490 618 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 OR4D1Q15615 310 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 TSNQ15631 228 aaKnown RBP13.69□□□□□ -0.22
VPS25-201ENST00000253794 KLHL35Q6PF15 583 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 AMIGO1Q86WK6 493 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 SPATA6LQ8N4H0 392 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 OR2L8Q8NGY9 312 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 STAG3L4Q8TBR4 150 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 LCN9Q8WX39 176 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 ATOH8Q96SQ7 321 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 PKP4Q99569 1192 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 DPYSL5Q9BPU6 564 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 TBC1D10AQ9BXI6 508 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 PCMTD2Q9NV79 361 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 KCNK4Q9NYG8 393 aa13.69□□□□□ -0.22
VPS25-201ENST00000253794 TSR3Q9UJK0 312 aaKnown RBP13.69□□□□□ -0.22
VPS25-201ENST00000253794 A0A1W2PQM1 296 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 OR5K3A6NET4 321 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 MATN2O00339 956 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 RGS16O15492 202 aaPredicted RBP13.68□□□□□ -0.22
VPS25-201ENST00000253794 KCNK5O95279 499 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 RBP1P09455 135 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 MYZAPP0CAP1 466 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 KRT4P19013 534 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 CD1CP29017 333 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
VPS25-201ENST00000253794 CRHR1P34998 444 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 OR1D5P58170 312 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 TGFBIQ15582 683 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 TECRLQ5HYJ1 363 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 ANKS6Q68DC2 871 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 KLC3Q6P597 504 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 WDR74Q6RFH5 385 aaPredicted RBP13.68□□□□□ -0.22
VPS25-201ENST00000253794 KLHDC8AQ8IYD2 350 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 LRRC56Q8IYG6 542 aaPredicted RBP13.68□□□□□ -0.22
VPS25-201ENST00000253794 ADGRF3Q8IZF5 1079 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 TMEM151AQ8N4L1 468 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 RAB42Q8N4Z0 105 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 LINC01555Q8NAE3 123 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 PDPRQ8NCN5 879 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 OR10G6Q8NH81 332 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 ALKBH8Q96BT7 664 aaKnown RBP13.68□□□□□ -0.22
VPS25-201ENST00000253794 FBXL8Q96CD0 374 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 TRIM54Q9BYV2 358 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 LRRN3Q9H3W5 708 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 SRMSQ9H3Y6 488 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 SSU72Q9NP77 194 aaKnown RBP13.68□□□□□ -0.22
VPS25-201ENST00000253794 PDP2Q9P2J9 529 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 DCDC2Q9UHG0 476 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 TDRKHQ9Y2W6 561 aaKnown RBP13.68□□□□□ -0.22
VPS25-201ENST00000253794 ENTPD2Q9Y5L3 495 aa13.68□□□□□ -0.22
VPS25-201ENST00000253794 MN1Q10571 1320 aaPredicted RBP13.67□□□□□ -0.22
VPS25-201ENST00000253794 ASXL3Q9C0F0 2248 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 ZNF839A8K0R7 811 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 TARM1B6A8C7 271 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 DUX1O43812 170 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 PRICKLE3O43900 615 aaPredicted RBP13.67□□□□□ -0.22
VPS25-201ENST00000253794 KLK8O60259 260 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 OPA1O60313 960 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 GLRA3O75311 464 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 SLC16A8O95907 504 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 C9P02748 559 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 PROS1P07225 676 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 HIST1H2AGP0C0S8 130 aaPredicted RBP13.67□□□□□ -0.22
VPS25-201ENST00000253794 HIST1H2ADP20671 130 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 IMPA1P29218 277 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 KCNC1P48547 511 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 HNMTP50135 292 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 PLCL1Q15111 1095 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 OOSP2Q86WS3 158 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 ZNF761Q86XN6 746 aaPredicted RBP13.67□□□□□ -0.22
VPS25-201ENST00000253794 GPSM1Q86YR5 675 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 CARFQ8N187 725 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 CACTIN-AS1Q8N1I8 211 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 BANPQ8N9N5 519 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 ZNF480Q8WV37 535 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 ATL1Q8WXF7 558 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 RSC1A1Q92681 617 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 HIST1H2AHQ96KK5 128 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 TSNARE1Q96NA8 513 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 HIST1H2AJQ99878 128 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 SH3GL2Q99962 352 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 MRPL57Q9BQC6 102 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms