RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 CNOT3O75175 753 aaKnown RBP9.96□□□□□ -0.82
VPS50-201ENST00000251739 SEMA7AO75326 666 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 VPS4BO75351 444 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 METTL18O95568 372 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 HBQ1P09105 142 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 UGT2B7P16662 529 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 FOXN2P32314 431 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 CYLC1P35663 651 aaPredicted RBP9.96□□□□□ -0.82
VPS50-201ENST00000251739 RWDD2BP57060 319 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 CACNG1Q06432 222 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 KRT33BQ14525 404 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 ITIH4Q14624 930 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 SPA17Q15506 151 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 INPP5JQ15735 1006 aaPredicted RBP9.96□□□□□ -0.82
VPS50-201ENST00000251739 RHBDD2Q6NTF9 364 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 DARS2Q6PI48 645 aaKnown RBP9.96□□□□□ -0.82
VPS50-201ENST00000251739 TRIM73Q86UV7 250 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 LURAP1LQ8IV03 231 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 C19orf47Q8N9M1 422 aaKnown RBP9.96□□□□□ -0.82
VPS50-201ENST00000251739 PHC3Q8NDX5 983 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 OR5AR1Q8NGP9 310 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 SLC35B2Q8TB61 432 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 PNPLA2Q96AD5 504 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 CDKN2AIPNLQ96HQ2 116 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 GBP5Q96PP8 586 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 OR2A14Q96R47 310 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 PANX2Q96RD6 677 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 FERD3LQ96RJ6 166 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 LACRTQ9GZZ8 138 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 KLHL25Q9H0H3 589 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 XKR8Q9H6D3 395 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 LRRC40Q9H9A6 602 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 LUC7LQ9NQ29 371 aaKnown RBP9.96□□□□□ -0.82
VPS50-201ENST00000251739 SPHK1Q9NYA1 384 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 GPR83Q9NYM4 423 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 VPS4AQ9UN37 437 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 PRSS21Q9Y6M0 314 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 HEATR5BQ9P2D3 2071 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 SLC5A10A0PJK1 596 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 GRID2IPA4D2P6 1211 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 SOWAHDA6NJG2 315 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 C9J4A7 227 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 E7EQ34 232 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 TJP3O95049 919 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 AP2A1O95782 977 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 CTSBP07858 339 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 CBSLP0DN79 551 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 PEBP1P30086 187 aaKnown RBP9.95□□□□□ -0.82
VPS50-201ENST00000251739 SHMT2P34897 504 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 CBSP35520 551 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 NSG1P42857 185 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 RRADP55042 308 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 GDF10P55107 478 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 PRKG2Q13237 762 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 POU6F1Q14863 301 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 PARP6Q2NL67 630 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 OXLD1Q5BKU9 147 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 ZRANB3Q5FWF4 1079 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 VWA5B1Q5TIE3 1220 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 IGFL3Q6UXB1 125 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 UNC5AQ6ZN44 842 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 RAB43Q86YS6 212 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 TBC1D21Q8IYX1 336 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 FAM71DQ8N9W8 422 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 STYXQ8WUJ0 223 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.95□□□□□ -0.82
VPS50-201ENST00000251739 TCTN2Q96GX1 697 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 IP6K3Q96PC2 410 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 ENAMQ9NRM1 1142 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 CUEDC1Q9NWM3 386 aaPredicted RBP9.95□□□□□ -0.82
VPS50-201ENST00000251739 OR6C2Q9NZP2 312 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 C5AR2Q9P296 337 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 PLEKHB1Q9UF11 243 aaPredicted RBP9.95□□□□□ -0.82
VPS50-201ENST00000251739 SERTAD3Q9UJW9 196 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 R3HDM2Q9Y2K5 976 aaKnown RBP9.95□□□□□ -0.82
VPS50-201ENST00000251739 EPN1Q9Y6I3 576 aaPredicted RBP9.95□□□□□ -0.82
VPS50-201ENST00000251739 AP1M2Q9Y6Q5 423 aa9.95□□□□□ -0.82
VPS50-201ENST00000251739 A0A0J9YY10 115 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 TCP11X1B4DZS4 312 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 QSOX1O00391 747 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 ZNF185O15231 689 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 AGFG2O95081 481 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 CHRM5P08912 532 aaPredicted RBP9.94□□□□□ -0.82
VPS50-201ENST00000251739 TPH1P17752 444 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 ITGAXP20702 1163 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 MSNP26038 577 aaKnown RBP9.94□□□□□ -0.82
VPS50-201ENST00000251739 SOX8P57073 446 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 ACVR1Q04771 509 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 SLC5A12Q1EHB4 618 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 DEFB110Q30KQ9 67 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 P3H1Q32P28 736 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 CRB2Q5IJ48 1285 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 FHL5Q5TD97 284 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 HIST2H2BCQ6DN03 193 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 RAD9BQ6WBX8 426 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 ARHGEF18Q6ZSZ5 1173 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 PPP1R32Q7Z5V6 425 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 TMEM151BQ8IW70 566 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 DNAJC22Q8N4W6 341 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 OR13J1Q8NGT2 312 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms