RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CTDSP2O14595 271 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 CPNE3O75131 537 aaKnown RBP13.8□□□□□ -0.2
SF1-201ENST00000227503 SCO1O75880 301 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 MOCS2O96007 188 aaPredicted RBP13.8□□□□□ -0.2
SF1-201ENST00000227503 HTR6P50406 440 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 ITKQ08881 620 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 ZMAT1Q5H9K5 638 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 ZNF438Q7Z4V0 828 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 MRPL10Q7Z7H8 261 aaKnown RBP13.8□□□□□ -0.2
SF1-201ENST00000227503 GALNT7Q86SF2 657 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 EID3Q8N140 333 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 HASPINQ8TF76 798 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 JPH3Q8WXH2 748 aaPredicted RBP13.8□□□□□ -0.2
SF1-201ENST00000227503 RPRD1BQ9NQG5 326 aaKnown RBP13.8□□□□□ -0.2
SF1-201ENST00000227503 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.8□□□□□ -0.2
SF1-201ENST00000227503 WBP11Q9Y2W2 641 aaKnown RBP13.8□□□□□ -0.2
SF1-201ENST00000227503 DOCK3Q8IZD9 2030 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 WASH4PA8MWX3 477 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 MMP2P08253 660 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 CBLP22681 906 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 MLLT6P55198 1093 aaPredicted RBP13.8□□□□□ -0.2
SF1-201ENST00000227503 LRRC26Q2I0M4 334 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 NEK10Q6ZWH5 1172 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 MILR1Q7Z6M3 343 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 MED30Q96HR3 178 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 SDHCQ99643 169 aaPredicted RBP13.8□□□□□ -0.2
SF1-201ENST00000227503 CHCHD6Q9BRQ6 235 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 DUSP21Q9H596 190 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 GMPPBQ9Y5P6 360 aa13.8□□□□□ -0.2
SF1-201ENST00000227503 M0QZQ0 153 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 CDC7O00311 574 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 OR4F21O95013 312 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 S1PR4O95977 384 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 B3GALT4O96024 378 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 POMCP01189 267 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 C1QCP02747 245 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 NTRK1P04629 796 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 FGF4P08620 206 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 CTSHP09668 335 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 S100A5P33763 92 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 DAB2P98082 770 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 TIAL1Q01085 375 aaKnown RBP eCLIP13.79□□□□□ -0.27e-8■■■■□ 22.6
SF1-201ENST00000227503 CD83Q01151 205 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 FOXD4Q12950 439 aaPredicted RBP13.79□□□□□ -0.2
SF1-201ENST00000227503 TSNQ15631 228 aaKnown RBP13.79□□□□□ -0.2
SF1-201ENST00000227503 PTCHD3Q3KNS1 767 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 CARD16Q5EG05 197 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 PIK3R6Q5UE93 754 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 GCNT7Q6ZNI0 430 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 RAB44Q7Z6P3 723 aaPredicted RBP13.79□□□□□ -0.2
SF1-201ENST00000227503 CCDC71Q8IV32 467 aaPredicted RBP13.79□□□□□ -0.2
SF1-201ENST00000227503 UBQLNLQ8IYU4 475 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 NT5MQ9NPB1 228 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 TPRKBQ9Y3C4 175 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 POLR3HQ9Y535 204 aaPredicted RBP13.79□□□□□ -0.2
SF1-201ENST00000227503 PTPRDP23468 1912 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 OR2A25A4D2G3 310 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 MROH6A6NGR9 719 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 C12orf71A8MTZ7 269 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 H3BQ06 376 aaPredicted RBP13.79□□□□□ -0.2
SF1-201ENST00000227503 J3KR12 359 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 M0QZ92 97 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 TEX28O15482 410 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 HSMCR30P0CW71 290 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 UBL4AP11441 157 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 CD86P42081 329 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 PIK3CGP48736 1102 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 NUDT6P53370 316 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 SNRPD2P62316 118 aaKnown RBP13.79□□□□□ -0.2
SF1-201ENST00000227503 SEMA3AQ14563 771 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 PTGR1Q14914 329 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 C6orf136Q5SQH8 315 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 ZNF544Q6NX49 715 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 PGBD5Q8N414 524 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 GLB1L3Q8NCI6 653 aaPredicted RBP13.79□□□□□ -0.2
SF1-201ENST00000227503 OR5H6Q8NGV6 325 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 SH3GL1Q99961 368 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 UGT2B28Q9BY64 529 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 CLPBQ9H078 707 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 MMP27Q9H306 513 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 ACTL8Q9H568 366 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 AGO3Q9H9G7 860 aaKnown RBP13.79□□□□□ -0.2
SF1-201ENST00000227503 SLC6A13Q9NSD5 602 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 SCN3BQ9NY72 215 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 TAS2R9Q9NYW1 312 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 NUFIP1Q9UHK0 495 aaKnown RBP13.79□□□□□ -0.2
SF1-201ENST00000227503 TBC1D24Q9ULP9 559 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 Q9Y3F1 56 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 ORC6Q9Y5N6 252 aa13.79□□□□□ -0.2
SF1-201ENST00000227503 NLRC5Q86WI3 1866 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 PATJQ8NI35 1801 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 MYADML2A6NDP7 307 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 M0R082 166 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 SLC7A4O43246 635 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 SERPINA1P01009 418 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 MYCLP1P12525 358 aaPredicted RBP13.78□□□□□ -0.2
SF1-201ENST00000227503 SLC10A7Q0GE19 358 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 PNCKQ6P2M8 343 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 PRSS48Q7RTY5 328 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 ZFAND4Q86XD8 727 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms