RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CCR7P32248 378 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 PTSQ03393 145 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 ZNF33BQ06732 778 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 CBX2Q14781 532 aaPredicted RBP21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 PLEKHS1Q5SXH7 462 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 TMEM214Q6NUQ4 689 aaKnown RBP21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 NEK10Q6ZWH5 1172 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 GPR149Q86SP6 731 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 GPR180Q86V85 440 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 OFCC1Q8IZS5 231 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 L3MBTL4Q8NA19 623 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 FAM162AQ96A26 154 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 VOPP1Q96AW1 172 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 SLC47A1Q96FL8 570 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 ITCHQ96J02 903 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 HIST1H2AHQ96KK5 128 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 HIST1H2AJQ99878 128 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 H2AFJQ9BTM1 129 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 ACPTQ9BZG2 426 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 PAIP1Q9H074 479 aaKnown RBP21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 RC3H2Q9HBD1 1191 aaKnown RBP21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 TLR9Q9NR96 1032 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 SLC25A37Q9NYZ2 338 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 CDH7Q9ULB5 785 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 INVSQ9Y283 1065 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 PCNTO95613 3336 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 KCNE1BA0A087WTH5 132 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 A0A1B0GVG6 124 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 GRM6O15303 877 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 LILRB3O75022 631 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 PDYNP01213 254 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 EPORP19235 508 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 S100A3P33764 101 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 SLC6A12P48065 614 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 B4GALNT1Q00973 533 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 DCTN2Q13561 401 aaKnown RBP21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 ATP13A5Q4VNC0 1218 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 CARD16Q5EG05 197 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 STK32CQ86UX6 486 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 TMC8Q8IU68 726 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 CLEC4FQ8N1N0 589 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 TMEM132CQ8N3T6 1108 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 NUDT8Q8WV74 236 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 TESCQ96BS2 214 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 DOK1Q99704 481 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 CPPED1Q9BRF8 314 aaPredicted RBP21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 SLC25A13Q9UJS0 675 aa21.45■■□□□ 1.03
SMARCD2-201ENST00000225742 ABHD14A-ACY1A0A1B0GW23 586 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 C16orf96A6NNT2 1141 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 G3V2T6 193 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 CLIC3O95833 236 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 JUNBP17275 347 aaPredicted RBP21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 RPL10P27635 214 aaKnown RBP21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 DCKP27707 260 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 HPCAP84074 193 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 RBM48Q5RL73 367 aaKnown RBP21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 OTUD3Q5T2D3 398 aaPredicted RBP21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 SLC39A5Q6ZMH5 540 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 KRTCAP2Q8N6L1 136 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 PJA1Q8NG27 643 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 SELENOMQ8WWX9 145 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 ASB11Q8WXH4 323 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 AUTS2Q8WXX7 1259 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 ELOVL6Q9H5J4 265 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 KAT8Q9H7Z6 458 aaKnown RBP21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 CXorf21Q9HAI6 301 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 PAK6Q9NQU5 681 aaPredicted RBP21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 DCAF13Q9NV06 445 aaKnown RBP21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 TMEM9Q9P0T7 183 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 IFT80Q9P2H3 777 aaPredicted RBP21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 OGDHLQ9ULD0 1010 aa21.45■■□□□ 1.02
SMARCD2-201ENST00000225742 A8MX80 341 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 LEFTY2O00292 366 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 WNT9AO14904 365 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 LRG1P02750 347 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 PPM1AP35813 382 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 RPS6KA3P51812 740 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 AP1S2P56377 157 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 PLIN5Q00G26 463 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 ZNF773Q6PK81 442 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 MBOAT1Q6ZNC8 495 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 EP400NLQ6ZTU2 488 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 ADHFE1Q8IWW8 467 aa21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 RBM4BQ9BQ04 359 aaKnown RBP21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 RBM4Q9BWF3 364 aaKnown RBP21.44■■□□□ 1.02
SMARCD2-201ENST00000225742 RECQL5O94762 991 aaPredicted RBP21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 CST1P01037 141 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 CYP2A7P20853 494 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 SPINT3P49223 89 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 GZMMP51124 257 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 POLR2LP62875 67 aaKnown RBP21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 CPSF6Q16630 551 aaKnown RBP eCLIP21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 ENPP6Q6UWR7 440 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 CCDC149Q6ZUS6 474 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 THAP5Q7Z6K1 395 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 BEND7Q8N7W2 519 aaPredicted RBP21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 FBXO30Q8TB52 745 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 GAB3Q8WWW8 586 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 FAM120BQ96EK7 910 aaKnown RBP21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 OSBPL10Q9BXB5 764 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms