RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 PRR23BQ6ZRT6 265 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 RTN4RL1Q86UN2 441 aaPredicted RBP13.72□□□□□ -0.21
USH1C-201ENST00000005226 SLC22A16Q86VW1 577 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 ZDHHC21Q8IVQ6 265 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 TTC30BQ8N4P2 665 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 RDH12Q96NR8 316 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 GPRC5BQ9NZH0 403 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 HCSTQ9UBK5 93 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 SLCO3A1Q9UIG8 710 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 ZNF232Q9UNY5 417 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 DHRS7Q9Y394 339 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 KRT87PA6NCN2 255 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 ULK1O75385 1050 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 OAZ2O95190 189 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 F11P03951 625 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 LCKP06239 509 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 BCKDHAP12694 445 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 EFNA1P20827 205 aaPredicted RBP13.72□□□□□ -0.21
USH1C-201ENST00000005226 GNPDA1P46926 289 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 FAM189BP81408 668 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 DUSP4Q13115 394 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 ZNF362Q5T0B9 420 aaPredicted RBP13.72□□□□□ -0.21
USH1C-201ENST00000005226 ATXN7L2Q5T6C5 722 aaPredicted RBP13.72□□□□□ -0.21
USH1C-201ENST00000005226 FAM171A1Q5VUB5 890 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 TMEM53Q6P2H8 277 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 LRRC8DQ7L1W4 858 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 GPR149Q86SP6 731 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 BHMTQ93088 406 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 PYCR2Q96C36 320 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 EGLN2Q96KS0 407 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 LRTM1Q9HBL6 345 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 WWOXQ9NZC7 414 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 H3BNC9 293 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 RGS14O43566 566 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 GABARAPO95166 117 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 TGM1P22735 817 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 TOP3AQ13472 1001 aaPredicted RBP13.71□□□□□ -0.21
USH1C-201ENST00000005226 NFE2Q16621 373 aaPredicted RBP13.71□□□□□ -0.21
USH1C-201ENST00000005226 SYT16Q17RD7 645 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 ALG1LQ6GMV1 187 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 RNF19BQ6ZMZ0 732 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 VTCN1Q7Z7D3 282 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 RASAL3Q86YV0 1011 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 SLC7A5P1Q8MH63 180 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 RNF175Q8N4F7 328 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 ZNF540Q8NDQ6 660 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 PSMA8Q8TAA3 256 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 PYURFQ96I23 114 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 P2RY12Q9H244 342 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 TRIT1Q9H3H1 467 aaKnown RBP13.71□□□□□ -0.21
USH1C-201ENST00000005226 TRMT13Q9NUP7 481 aaKnown RBP13.71□□□□□ -0.21
USH1C-201ENST00000005226 C1orf109Q9NX04 203 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 NAALAD2Q9Y3Q0 740 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 ARIH1Q9Y4X5 557 aaPredicted RBP13.71□□□□□ -0.21
USH1C-201ENST00000005226 ORC6Q9Y5N6 252 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 GRXCR2A6NFK2 248 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 NBNO60934 754 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 SLC25A14O95258 325 aaPredicted RBP13.71□□□□□ -0.21
USH1C-201ENST00000005226 GSTT2P0CG29 244 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 GSTT2BP0CG30 244 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 IRF1P10914 325 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 PTGER3P43115 390 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 EPS8Q12929 822 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 CLCA4Q14CN2 919 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 CLLU1OSQ5K130 101 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 CPZQ66K79 652 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 Q6ZPB1 254 aaPredicted RBP13.71□□□□□ -0.21
USH1C-201ENST00000005226 P2RY8Q86VZ1 359 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 AADATQ8N5Z0 425 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 PSD4Q8NDX1 1056 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 PIK3C3Q8NEB9 887 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 OR6Q1Q8NGQ2 317 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 HTRA1Q92743 480 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 WBP2Q969T9 261 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 YIPF6Q96EC8 236 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 BTBD2Q9BX70 525 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 GPR63Q9BZJ6 419 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 WDR12Q9GZL7 423 aaKnown RBP13.71□□□□□ -0.21
USH1C-201ENST00000005226 NACA2Q9H009 215 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 MAGEH1Q9H213 219 aa13.71□□□□□ -0.21
USH1C-201ENST00000005226 RAD51BO15315 384 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 SLC16A6O15403 523 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 KDELR3O43731 214 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 ACSL4O60488 711 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 GLUD1P00367 558 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 ESR1P03372 595 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 RHOCP08134 193 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 RCVRNP35243 200 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 SEPHS1P49903 392 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 GZMMP51124 257 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 CACHD1Q5VU97 1274 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 RNF219Q5W0B1 726 aaPredicted RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 DOK6Q6PKX4 331 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 SERPINA9Q86WD7 417 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 GPR62Q9BZJ7 368 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 CLMPQ9H6B4 373 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 SPC25Q9HBM1 224 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 AMBNQ9NP70 447 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 ABCB10Q9NRK6 738 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 OPTCQ9UBM4 332 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms