RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 MATN4O95460 622 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 C1QAP02745 245 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 EIF2S3P41091 472 aaKnown RBP25.9■■□□□ 1.74
VEGFA-231ENST00000640499 SEPHS1P49903 392 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 GPX6P59796 221 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 CCSMST1Q4G0I0 132 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 CACHD1Q5VU97 1274 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 KLHL35Q6PF15 583 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 FBXO38Q6PIJ6 1188 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 UNC5DQ6UXZ4 953 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 LMNTD1Q8N9Z9 388 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 CD200R1Q8TD46 325 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 PYROXD1Q8WU10 500 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 GPR21Q99679 349 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 THSD1Q9NS62 852 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 KLHL42Q9P2K6 505 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 CIDEBQ9UHD4 219 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 POLG2Q9UHN1 485 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 TDRKHQ9Y2W6 561 aaKnown RBP25.9■■□□□ 1.74
VEGFA-231ENST00000640499 DHRS7Q9Y394 339 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 KMT2BQ9UMN6 2715 aaPredicted RBP25.9■■□□□ 1.74
VEGFA-231ENST00000640499 KRT87PA6NCN2 255 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 B4E171 279 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 NVLO15381 856 aaKnown RBP25.89■■□□□ 1.74
VEGFA-231ENST00000640499 PRAMEF10O60809 474 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 ATP5DP30049 168 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 TSPAN7P41732 249 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 PGGT1BP53609 377 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 CDKN2DP55273 166 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 SH3BP2P78314 561 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 MC2RQ01718 297 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 MGAT5Q09328 741 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 CUL1Q13616 776 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 KYNUQ16719 465 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 CYHR1Q6ZMK1 362 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 CAPN12Q6ZSI9 719 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 FLVCR1-AS1Q8TAF5 88 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 MCMBPQ9BTE3 642 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 PHACTR1Q9C0D0 580 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 AKAP7Q9P0M2 348 aaPredicted RBP25.89■■□□□ 1.74
VEGFA-231ENST00000640499 TSR3Q9UJK0 312 aaKnown RBP25.89■■□□□ 1.74
VEGFA-231ENST00000640499 POMT2Q9UKY4 750 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 COMMD10Q9Y6G5 202 aa25.89■■□□□ 1.74
VEGFA-231ENST00000640499 E5RI56 91 aa25.88■■□□□ 1.73
VEGFA-231ENST00000640499 C1orf105O95561 183 aa25.88■■□□□ 1.73
VEGFA-231ENST00000640499 RASGRP3Q8IV61 690 aa25.88■■□□□ 1.73
VEGFA-231ENST00000640499 LRRN4CLQ8ND94 238 aa25.88■■□□□ 1.73
VEGFA-231ENST00000640499 SLC41A2Q96JW4 573 aa25.88■■□□□ 1.73
VEGFA-231ENST00000640499 APMAPQ9HDC9 416 aa25.88■■□□□ 1.73
VEGFA-231ENST00000640499 SPHK1Q9NYA1 384 aa25.88■■□□□ 1.73
VEGFA-231ENST00000640499 CXorf49A8MYA2 514 aaPredicted RBP25.87■■□□□ 1.73
VEGFA-231ENST00000640499 RASSF9O75901 435 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 PRDX3P30048 256 aaKnown RBP25.87■■□□□ 1.73
VEGFA-231ENST00000640499 PEBP1P30086 187 aaKnown RBP25.87■■□□□ 1.73
VEGFA-231ENST00000640499 BDKRB1P46663 353 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 KLHL38Q2WGJ6 581 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 DNTTIP2Q5QJE6 756 aaKnown RBP25.87■■□□□ 1.73
VEGFA-231ENST00000640499 FAM129CQ86XR2 697 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 LINC01555Q8NAE3 123 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 INPP5DQ92835 1189 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 IL17FQ96PD4 163 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 TAAR9Q96RI9 348 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 CD180Q99467 661 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 CCDC68Q9H2F9 335 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 FBXO8Q9NRD0 319 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 SLC39A1Q9NY26 324 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 ACSL6Q9UKU0 697 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 PCDHGA3Q9Y5H0 932 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 B3GALT1Q9Y5Z6 326 aa25.87■■□□□ 1.73
VEGFA-231ENST00000640499 NELFEP18615 380 aaKnown RBP25.86■■□□□ 1.73
VEGFA-231ENST00000640499 ECHS1P30084 290 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 PKLRP30613 574 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 SHMT2P34897 504 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 MAGEA4P43358 317 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 ANKS6Q68DC2 871 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 DCUN1D3Q8IWE4 304 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 PALM2Q8IXS6 379 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 CPNE9Q8IYJ1 553 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 CTRCQ99895 268 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 B3GNT4Q9C0J1 378 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 LRRC4CQ9HCJ2 640 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 ACTR10Q9NZ32 417 aa25.86■■□□□ 1.73
VEGFA-231ENST00000640499 A0A087WV48 116 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 TCRBV9S1A1TA0A576 114 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 GSAPA4D1B5 854 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 TLCD2A6NGC4 264 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 CHRM5P08912 532 aaPredicted RBP25.85■■□□□ 1.73
VEGFA-231ENST00000640499 GLE1Q53GS7 698 aaKnown RBP25.85■■□□□ 1.73
VEGFA-231ENST00000640499 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.85■■□□□ 1.73
VEGFA-231ENST00000640499 UBAP2Q5T6F2 1119 aaKnown RBP25.85■■□□□ 1.73
VEGFA-231ENST00000640499 CYS1Q717R9 158 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 CCDC25Q86WR0 208 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 CEP112Q8N8E3 955 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 DENND1AQ8TEH3 1009 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 UBXN4Q92575 508 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 OR2A14Q96R47 310 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 OLFM1Q99784 485 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 PITPNM3Q9BZ71 974 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 OR6C2Q9NZP2 312 aa25.85■■□□□ 1.73
VEGFA-231ENST00000640499 SDK2Q58EX2 2172 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms