RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 UBAP1Q9NZ09 502 aa14.77□□□□□ -0.05
TRIM3-215ENST00000639856 PKD2L2Q9NZM6 624 aa14.77□□□□□ -0.05
TRIM3-215ENST00000639856 LRRK1Q38SD2 2015 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 TBC1D3BA6NDS4 549 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 GRXCR2A6NFK2 248 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 K7EPI3 171 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 MTX2O75431 263 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 TIPRLO75663 272 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 G6PDP11413 515 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 ZNF30P17039 623 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 XPAP23025 273 aaPredicted RBP14.76□□□□□ -0.05
TRIM3-215ENST00000639856 HNRNPA1L2Q32P51 320 aaKnown RBP14.76□□□□□ -0.05
TRIM3-215ENST00000639856 MTX3Q5HYI7 312 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 RABL3Q5HYI8 236 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 ATAT1Q5SQI0 421 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 C6orf52Q5T4I8 152 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 AMIGO2Q86SJ2 522 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 SPPL2CQ8IUH8 684 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 KIAA2013Q8IYS2 634 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 CPA6Q8N4T0 437 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 ZNF597Q96LX8 424 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 TRIM8Q9BZR9 551 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 S1PR5Q9H228 398 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 ACTL8Q9H568 366 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 DKK3Q9UBP4 350 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 HCN2Q9UL51 889 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 CCL27Q9Y4X3 112 aa14.76□□□□□ -0.05
TRIM3-215ENST00000639856 IGLV3-16A0A075B6K0 115 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 DHRS12A0PJE2 317 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 ARPC2O15144 300 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 SPINT1O43278 529 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 MMP12P39900 470 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 GSK3BP49841 420 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 ADAM15Q13444 863 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 INPP5AQ14642 412 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 EIF4HQ15056 248 aaKnown RBP14.75□□□□□ -0.05
TRIM3-215ENST00000639856 NRF1Q16656 503 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 RFTN2Q52LD8 501 aaPredicted RBP14.75□□□□□ -0.05
TRIM3-215ENST00000639856 ZDHHC20Q5W0Z9 365 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 CYP20A1Q6UW02 462 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 SERPINA13PQ6UXR4 307 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 RNF165Q6ZSG1 346 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 DPPA4Q7L190 304 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 DET1Q7L5Y6 550 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 ERMP1Q7Z2K6 904 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 PTRH1Q86Y79 214 aaKnown RBP14.75□□□□□ -0.05
TRIM3-215ENST00000639856 YAF2Q8IY57 180 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 DPP10Q8N608 796 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 LRIG1Q96JA1 1093 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 PPP3R2Q96LZ3 170 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 CNBD2Q96M20 576 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 NTMT1Q9BV86 223 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 TMEM245Q9H330 911 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 SLAMF8Q9P0V8 285 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 ZFC3H1O60293 1989 aaKnown RBP14.75□□□□□ -0.05
TRIM3-215ENST00000639856 TNRC18O15417 2968 aaPredicted RBP14.75□□□□□ -0.05
TRIM3-215ENST00000639856 EDDM13A0A1B0GTR0 161 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 ANKRD28O15084 1053 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 HNRNPRO43390 633 aaKnown RBP14.75□□□□□ -0.05
TRIM3-215ENST00000639856 AKAP10O43572 662 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 BMP2P12643 396 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 LAMP2P13473 410 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 PSMC3P17980 439 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 GDI1P31150 447 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 CCR7P32248 378 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 CASP2P42575 452 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 CLCN2P51788 898 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 EEFSECP57772 596 aaKnown RBP14.75□□□□□ -0.05
TRIM3-215ENST00000639856 LIPEQ05469 1076 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 COL13A1Q5TAT6 717 aaPredicted RBP14.75□□□□□ -0.05
TRIM3-215ENST00000639856 NANOGP8Q6NSW7 305 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 ANKFN1Q8N957 763 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 ARRDC3Q96B67 414 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 ULK4Q96C45 1275 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 WRAP53Q9BUR4 548 aaKnown RBP14.75□□□□□ -0.05
TRIM3-215ENST00000639856 RIOK2Q9BVS4 552 aaKnown RBP14.75□□□□□ -0.05
TRIM3-215ENST00000639856 FAM83DQ9H4H8 585 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 NANOGQ9H9S0 305 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 AK5Q9Y6K8 562 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 ATG2BQ96BY7 2078 aa14.75□□□□□ -0.05
TRIM3-215ENST00000639856 C7orf72A4D263 438 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 FADS2P1A8MWK0 482 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 EIF3FO00303 357 aaPredicted RBP14.74□□□□□ -0.05
TRIM3-215ENST00000639856 ANXA5P08758 320 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 ENO2P09104 434 aaPredicted RBP14.74□□□□□ -0.05
TRIM3-215ENST00000639856 OR56A5P0C7T3 313 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 EBLN1P0CF75 366 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 EPB42P16452 691 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 PSMA4P25789 261 aaKnown RBP14.74□□□□□ -0.05
TRIM3-215ENST00000639856 IL12RB1P42701 662 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 LIN52Q52LA3 116 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 HABP4Q5JVS0 413 aaKnown RBP14.74□□□□□ -0.05
TRIM3-215ENST00000639856 TBCELQ5QJ74 424 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 ZNF648Q5T619 568 aaPredicted RBP14.74□□□□□ -0.05
TRIM3-215ENST00000639856 PRR23BQ6ZRT6 265 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 IFNEQ86WN2 208 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 TDHQ8IZJ6 230 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 FAM110BQ8TC76 370 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 FAM129BQ96TA1 746 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 CIB1Q99828 191 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms