RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 RFC1P35251 1148 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 PIK3CAP42336 1068 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 CLCN5P51795 746 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TERF1P54274 439 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 PNLIPRP2P54317 469 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 RPS13P62277 151 aaKnown RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TSPY1Q01534 308 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ID2Q02363 134 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ACSM2AQ08AH3 577 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 FAM27E3Q08E93 113 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 KCNC3Q14003 757 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 CDC37Q16543 378 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 PTGISQ16647 500 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 SOWAHAQ2M3V2 549 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 QRICH1Q2TAL8 776 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ODF3L2Q3SX64 289 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 HSDL1Q3SXM5 330 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 EPC2Q52LR7 807 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ASPRV1Q53RT3 343 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ESCO2Q56NI9 601 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 SGO1Q5FBB7 561 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 HERC4Q5GLZ8 1057 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TCP11X2Q5H9J9 407 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 C9orf152Q5JTZ5 239 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TMEM31Q5JXX7 168 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 PIK3CD-AS1Q5SR53 167 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 KRT79Q5XKE5 535 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ACSM2BQ68CK6 577 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ADALQ6DHV7 355 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 PLEKHA7Q6IQ23 1121 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 LRRC8EQ6NSJ5 796 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 LCTLQ6UWM7 567 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 SEPT14Q6ZU15 432 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 DENND5BQ6ZUT9 1274 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 LINGO2Q7L985 606 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 DEFB128Q7Z7B8 93 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 NOXA1Q86UR1 476 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 KBTBD6Q86V97 674 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 VSIG1Q86XK7 387 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 LURAP1LQ8IV03 231 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 DENND6AQ8IWF6 608 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC35F3Q8IY50 421 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ZNF444Q8N0Y2 327 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 MMP21Q8N119 569 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TDRD5Q8NAT2 981 aaKnown RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 KDM1BQ8NB78 822 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 POGLUT1Q8NBL1 392 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 BEST2Q8NFU1 509 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TOP1MTQ969P6 601 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 OTULINQ96BN8 352 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 MRPL38Q96DV4 380 aaKnown RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ELMOD3Q96FG2 381 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ZNF419Q96HQ0 510 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC41A2Q96JW4 573 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 INPP4AQ96PE3 977 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 GCNAQ96QF7 691 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TAAR1Q96RJ0 339 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TGS1Q96RS0 853 aaKnown RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ABHD1Q96SE0 405 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TUBB6Q9BUF5 446 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 NACAP1Q9BZK3 213 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 EDEM3Q9BZQ6 932 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 CPVLQ9H3G5 476 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 PLK3Q9H4B4 646 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 MVB12BQ9H7P6 319 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ERVMER34-1Q9H9K5 563 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 LTB4R2Q9NPC1 389 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 SETD4Q9NVD3 440 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 CPSF2Q9P2I0 782 aaKnown RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 PLEKHB1Q9UF11 243 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 EXO1Q9UQ84 846 aaKnown RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 PTRH2Q9Y3E5 179 aaKnown RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 RAP2CQ9Y3L5 183 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 MAU2Q9Y6X3 613 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 DOCK8Q8NF50 2099 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 BSNQ9UPA5 3926 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 GPR179Q6PRD1 2367 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ANKRD11Q6UB99 2663 aaPredicted RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ADGRA3Q8IWK6 1321 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ATMQ13315 3056 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 EP300Q09472 2414 aaPredicted RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CFAP46Q8IYW2 2715 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 hCG_1809904A0A1W2PP81 198 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 A0A1W2PPE2 198 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 A0A1W2PR64 198 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 A0A1W2PR77 199 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 LOC730098B7Z3J9 87 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ADAMDEC1O15204 470 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 DCXO43602 365 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 RANBP6O60518 1105 aaKnown RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ATP2C2O75185 946 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 JRKO75564 520 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 MTA2O94776 668 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 HSPA4LO95757 839 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CHRNA1P02708 482 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 MMP1P03956 469 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 LGALS2P05162 132 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 MMP2P08253 660 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 QDPRP09417 244 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms