RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 RALYQ9UKM9 306 aaKnown RBP6.25□□□□□ -1.41
TCF4-249ENST00000625716 WDR37Q9Y2I8 494 aa6.25□□□□□ -1.41
TCF4-249ENST00000625716 HEBP2Q9Y5Z4 205 aa6.25□□□□□ -1.41
TCF4-249ENST00000625716 MAP1BP46821 2468 aaKnown RBP6.25□□□□□ -1.41
TCF4-249ENST00000625716 GOLGA4Q13439 2230 aaKnown RBP6.25□□□□□ -1.41
TCF4-249ENST00000625716 MYLKQ15746 1914 aa6.25□□□□□ -1.41
TCF4-249ENST00000625716 GOLGA6L10A0A0M3HER8 536 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 UBA6A0AVT1 1052 aaPredicted RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 MROH6A6NGR9 719 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 AGAP14A8MT82 685 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 B4E171 279 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 STMND1H3BQB6 276 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 POLR1CO15160 346 aaPredicted RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 FTH1P02794 183 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 GSTM1P09488 218 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 OR56A5P0C7T3 313 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 ZSCAN5DPP0CG00 497 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 MTHFD1P11586 935 aaKnown RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 BRAFP15056 766 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 CA5AP35218 305 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 ETV5P41161 510 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 TSPAN7P41732 249 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 NSG1P42857 185 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 CAPZBP47756 277 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 KCNJ1P48048 391 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 NPY2RP49146 381 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 PRLHRP49683 370 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 SEPHS1P49903 392 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 CDKN1CP49918 316 aaPredicted RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 SESN2P58004 480 aaPredicted RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 MC2RQ01718 297 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 FOXM1Q08050 763 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 PRKAA1Q13131 559 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 ITIH4Q14624 930 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 SYTL3Q4VX76 610 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 TAF1BQ53T94 588 aaPredicted RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 AARS2Q5JTZ9 985 aaKnown RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 PCID2Q5JVF3 399 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 TSTD2Q5T7W7 516 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 CACHD1Q5VU97 1274 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 AFTPHQ6ULP2 937 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 CERS6Q6ZMG9 384 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 FAM83HQ6ZRV2 1179 aaPredicted RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 ARHGAP22Q7Z5H3 698 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 PRUNE1Q86TP1 453 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 ZFAND4Q86XD8 727 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 OR4L1Q8NH43 312 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 EPS8L3Q8TE67 593 aaKnown RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 NAT14Q8WUY8 206 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 ZFPM2Q8WW38 1151 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 HDAC10Q969S8 669 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 MAGOHBQ96A72 148 aaKnown RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 CRELD1Q96HD1 420 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 LINC00615Q96LM1 132 aaPredicted RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 C9orf72Q96LT7 481 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 FERD3LQ96RJ6 166 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 RANBP9Q96S59 729 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 CPNE5Q9HCH3 593 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 LRRC4CQ9HCJ2 640 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 CASS4Q9NQ75 786 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 EIF2B3Q9NR50 452 aaKnown RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 HRASLS2Q9NWW9 162 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 OCIAD1Q9NX40 245 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 CRIM1Q9NZV1 1036 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 FOXJ2Q9P0K8 574 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 PDP2Q9P2J9 529 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 ACSL6Q9UKU0 697 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 RIMKLBQ9ULI2 386 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 PCDHGA3Q9Y5H0 932 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 CFAP20Q9Y6A4 193 aaKnown RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 U3KQE9 123 aa6.24□□□□□ -1.41
TCF4-249ENST00000625716 MN1Q10571 1320 aaPredicted RBP6.24□□□□□ -1.41
TCF4-249ENST00000625716 IGLV3-16A0A075B6K0 115 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 TRBV5-4A0A0C4DH59 114 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 CCDC162PA2VCL2 907 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 OR51F1A6NGY5 319 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 PGRMC1O00264 195 aaKnown RBP6.23□□□□□ -1.41
TCF4-249ENST00000625716 LIN7AO14910 233 aaPredicted RBP6.23□□□□□ -1.41
TCF4-249ENST00000625716 PFDN6O15212 129 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 NDUFB5O43674 189 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 KDM1AO60341 852 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 GOT2P00505 430 aaKnown RBP6.23□□□□□ -1.41
TCF4-249ENST00000625716 KRT14P02533 472 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 C9P02748 559 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 ANKRD34CP0C6C1 535 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 PRSS56P0CW18 603 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 GRIA1P42261 906 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 CD151P48509 253 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 VPS41P49754 854 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 TERF1P54274 439 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 GFERP55789 205 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 CDK16Q00536 496 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 RHDQ02161 417 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 PLOD1Q02809 727 aaPredicted RBP6.23□□□□□ -1.41
TCF4-249ENST00000625716 GPS1Q13098 491 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 RPA4Q13156 261 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 SIX1Q15475 284 aaPredicted RBP6.23□□□□□ -1.41
TCF4-249ENST00000625716 TGIF1Q15583 401 aa6.23□□□□□ -1.41
TCF4-249ENST00000625716 TRIP13Q15645 432 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms