RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 C5AR2Q9P296 337 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 FAM8A1Q9UBU6 413 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 SLC24A2Q9UI40 661 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 BTRCQ9Y297 605 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 PADI2Q9Y2J8 665 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 GSAPA4D1B5 854 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 LRRD1A4D1F6 860 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 SLC9B1P1A6NJY1 282 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 PPP1R12AO14974 1030 aaPredicted RBP7.6□□□□□ -1.19
CLK1-215ENST00000621181 UGT1A9O60656 530 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 SLC35G4P0C7Q5 338 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 UGT1A6P19224 532 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 POLR2CP19387 275 aaPredicted RBP7.6□□□□□ -1.19
CLK1-215ENST00000621181 HLA-DPA1P20036 260 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 UGT1A1P22309 533 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 UGT1A4P22310 534 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 OTX2P32243 289 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 RORAP35398 523 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 SPAM1P38567 509 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 PREPP48147 710 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 CCT5P48643 541 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 TAS2R40P59535 323 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 ITGA9Q13797 1035 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 NCF4Q15080 339 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 PDK1Q15118 436 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 METRNLQ641Q3 311 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 DUS1LQ6P1R4 473 aaKnown RBP7.6□□□□□ -1.19
CLK1-215ENST00000621181 FAM198BQ6UWH4 519 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 THSD4Q6ZMP0 1018 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 ZBTB2Q8N680 514 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 PLD5Q8N7P1 536 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 DDHD1Q8NEL9 900 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 OR4E2Q8NGC2 313 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 ZFPM2Q8WW38 1151 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 TM9SF4Q92544 642 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 RAPGEF5Q92565 580 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 ALG3Q92685 438 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 FER1L6-AS2Q96M78 137 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 RNF157Q96PX1 679 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 MAK16Q9BXY0 300 aaKnown RBP7.6□□□□□ -1.19
CLK1-215ENST00000621181 WWP1Q9H0M0 922 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 EPB41L4BQ9H329 900 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 UGT1A7Q9HAW7 530 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 UGT1A10Q9HAW8 530 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 UGT1A8Q9HAW9 530 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 C1GALT1Q9NS00 363 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 ZDHHC18Q9NUE0 388 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.6□□□□□ -1.19
CLK1-215ENST00000621181 CTTNBP2NLQ9P2B4 639 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 SERTAD3Q9UJW9 196 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 PKP3Q9Y446 797 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 SPO11Q9Y5K1 396 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 DNMT3AQ9Y6K1 912 aaPredicted RBP7.6□□□□□ -1.19
CLK1-215ENST00000621181 COLEC10Q9Y6Z7 277 aa7.6□□□□□ -1.19
CLK1-215ENST00000621181 CSMD1Q96PZ7 3565 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 GLYATL1P3A0A0U1RQE8 302 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 E7EQ34 232 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 MATN2O00339 956 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 APOL1O14791 398 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 LDB2O43679 373 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 PROSCO94903 275 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 MSH3P20585 1137 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 AGXTP21549 392 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 KDELR1P24390 212 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 ELAVL4P26378 380 aaKnown RBP7.59□□□□□ -1.19
CLK1-215ENST00000621181 LSP1P33241 339 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 MDH1P40925 334 aaKnown RBP7.59□□□□□ -1.19
CLK1-215ENST00000621181 ADCY2Q08462 1091 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 SLC14A2Q15849 920 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 GPRC6AQ5T6X5 926 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 C1QL3Q5VWW1 255 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 DUPD1Q68J44 220 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 DET1Q7L5Y6 550 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 GLT6D1Q7Z4J2 308 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 MRGPREQ86SM8 312 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 DAAM2Q86T65 1068 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 LAPTM4BQ86VI4 370 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 BLOC1S5Q8TDH9 187 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 BCAS4Q8TDM0 211 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 N4BP2L2Q92802 583 aaPredicted RBP7.59□□□□□ -1.19
CLK1-215ENST00000621181 LRRC45Q96CN5 670 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 IP6K3Q96PC2 410 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 RANBP9Q96S59 729 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 INSM2Q96T92 566 aaPredicted RBP7.59□□□□□ -1.19
CLK1-215ENST00000621181 DPH2Q9BQC3 489 aaPredicted RBP7.59□□□□□ -1.19
CLK1-215ENST00000621181 TRABDQ9H4I3 376 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 SYTL2Q9HCH5 934 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 PCMTD2Q9NV79 361 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 AMFRQ9UKV5 643 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 POMT2Q9UKY4 750 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 ACSL5Q9ULC5 683 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 SRPK3Q9UPE1 567 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 PCDHA3Q9Y5H8 950 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 COPG1Q9Y678 874 aaKnown RBP7.59□□□□□ -1.19
CLK1-215ENST00000621181 POLQO75417 2590 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 CCDC88CQ9P219 2028 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 C2CD3Q4AC94 2353 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 A0A087WUV0 522 aaPredicted RBP7.59□□□□□ -1.19
CLK1-215ENST00000621181 KLHL33A6NCF5 533 aa7.59□□□□□ -1.19
CLK1-215ENST00000621181 MGAT4DA6NG13 374 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms