RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	LRAT	O95237	230 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ENO2	P09104	434 aa	Predicted RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	VARS	P26640	1264 aa	Known RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	SPAM1	P38567	509 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	MAPK10	P53779	464 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	BOP1	Q14137	746 aa	Known RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	MAPKAPK3	Q16644	382 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ATP13A5	Q4VNC0	1218 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	INTS11	Q5TA45	600 aa	Known RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	FIP1L1	Q6UN15	594 aa	Known RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CLEC4F	Q8N1N0	589 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	RNF175	Q8N4F7	328 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	SLAIN1	Q8ND83	568 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TSPEAR	Q8WU66	669 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	RHBDF1	Q96CC6	855 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	IKZF5	Q9H5V7	419 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ACTR8	Q9H981	624 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	THEG	Q9P2T0	379 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	LIMD1	Q9UGP4	676 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	SLC8A2	Q9UPR5	921 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	EIF3L	Q9Y262	564 aa	Known RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	OARD1	Q9Y530	152 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	hCG_2014768	A0A024R1R8	64 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	RGS14	O43566	566 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	KCNH1	O95259	989 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	IGSF6	O95976	241 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	UGT2B4	P06133	528 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	EPB42	P16452	691 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	RPS9	P46781	194 aa	Known RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	RPIA	P49247	311 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	GRIK2	Q13002	908 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CRY1	Q16526	586 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TRIM60	Q495X7	471 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CRTC1	Q6UUV9	634 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ENPP6	Q6UWR7	440 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	GCNT7	Q6ZNI0	430 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	STK32C	Q86UX6	486 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	PTRH1	Q86Y79	214 aa	Known RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TBC1D21	Q8IYX1	336 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	MRPS31	Q92665	395 aa	Known RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	PPP1R14B	Q96C90	147 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	PDLIM5	Q96HC4	596 aa	Known RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ZBTB18	Q99592	522 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	IL21	Q9HBE4	155 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	LTB4R2	Q9NPC1	389 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	RSL24D1	Q9UHA3	163 aa	Known RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ACAD8	Q9UKU7	415 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	B4GAT1	O43505	415 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	SH3BGRL	O75368	114 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	RASAL1	O95294	804 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	SERPINA4	P29622	427 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	PLEKHG6	Q3KR16	790 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	POM121L1P	Q3SYA9	428 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ALKBH2	Q6NS38	261 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	HS3ST5	Q8IZT8	346 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	NXPE1	Q8N323	547 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	PDPR	Q8NCN5	879 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	SLC13A3	Q8WWT9	602 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	NCLN	Q969V3	563 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	RNF208	Q9H0X6	261 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	HEBP1	Q9NRV9	189 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	SMPD3	Q9NY59	655 aa	Predicted RBP	13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	DKK3	Q9UBP4	350 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	SLCO3A1	Q9UIG8	710 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TMCO1	Q9UM00	188 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ATP11B	Q9Y2G3	1177 aa		13.59	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ZNF821	O75541	412 aa	Predicted RBP	13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TRMU	O75648	421 aa	Known RBP	13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	STK16	O75716	305 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	CD9	P21926	228 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	EEF1B2	P24534	225 aa	Known RBP	13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	HTR1E	P28566	365 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	PWP1	Q13610	501 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SLC36A3	Q495N2	470 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	GPRC6A	Q5T6X5	926 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ANKRD34A	Q69YU3	496 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SUSD1	Q6UWL2	747 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ZNF783	Q6ZMS7	281 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	UNC80	Q8N2C7	3258 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	OR2T12	Q8NG77	320 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	PPP3R2	Q96LZ3	170 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TSSK3	Q96PN8	268 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	DCUN1D5	Q9BTE7	237 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ADGRE2	Q9UHX3	823 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	STOML2	Q9UJZ1	356 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390		A0A1W2PQ67	120 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390		K7EPI3	171 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ANKRD28	O15084	1053 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	NOBOX	O60393	691 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	EFEMP2	O95967	443 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	GLUD1	P00367	558 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	FCGR1A	P12314	374 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	AKT1	P31749	480 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	CCR7	P32248	378 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	GNPDA1	P46926	289 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	NAA20	P61599	178 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TUBA1B	P68363	451 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	HTRA3	P83110	453 aa		13.58	□□□□□ -0.24
CACNA1C-231	ENST00000616390	RAB33A	Q14088	237 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms