RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 FAM189BP81408 668 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ITGADQ13349 1161 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZBED5Q49AG3 693 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 GTDC1Q4AE62 458 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZDHHC21Q8IVQ6 265 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PGBD5Q8N414 524 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 DTWD1Q8N5C7 304 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF540Q8NDQ6 660 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 STARD8Q92502 1023 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 SUSD6Q92537 303 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CRISPLD1Q9H336 500 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC32A1Q9H598 525 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 RUVBL1Q9Y265 456 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CLIC1O00299 241 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 XYLBO75191 536 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 SOD2P04179 222 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CYP4B1P13584 511 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 HOXB6P17509 224 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PPIBP23284 216 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMED10P49755 219 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 STK19P49842 368 aaPredicted RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ENTPD1P49961 510 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CYP4F3Q08477 520 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 BNIP3Q12983 259 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 LSAMPQ13449 338 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 MBTPS1Q14703 1052 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 LY6G5CQ5SRR4 150 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 LCN8Q6JVE9 175 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMEM207Q6UWW9 146 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CHERPQ8IWX8 916 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 LIX1Q8N485 282 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 TEX26Q8N6G2 289 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 AMER2Q8N7J2 671 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLAIN1Q8ND83 568 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 GIPC3Q8TF64 312 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 SCRN2Q96FV2 425 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF597Q96LX8 424 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ELAC1Q9H777 363 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 HMG20AQ9NP66 347 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZDHHC3Q9NYG2 299 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CEP295Q9C0D2 2601 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 RREB1Q92766 1687 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 H3BN98 237 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 FKTNO75072 461 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PRAMEF12O95522 483 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PRLP01236 227 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 EBLN1P0CF75 366 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 RPS6KA3P51812 740 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 SRSF11Q05519 484 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 MAPK11Q15759 364 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CYP2A13Q16696 494 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF697Q5TEC3 545 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ATG14Q6ZNE5 492 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CMTR2Q8IYT2 770 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PHC3Q8NDX5 983 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 GPR150Q8NGU9 434 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 RAD51AP1Q96B01 352 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 EGLN2Q96KS0 407 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 HEPHQ9BQS7 1158 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CEP44Q9C0F1 390 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF696Q9H7X3 374 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 TNFRSF12AQ9NP84 129 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 TBC1D14Q9P2M4 693 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.52□□□□□ -1.538e-9■■■□□ 18.5
SYNCRIP-204ENST00000616122 SHANK3Q9BYB0 1731 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 DOPEY2Q9Y3R5 2298 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 IGLV3-10A0A075B6K4 115 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CST5P28325 142 aaPredicted RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 SERPINB1P30740 379 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 TXNL4AP83876 142 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PERM1Q5SV97 790 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 OR4F3Q6IEY1 312 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 KLHDC10Q6PID8 442 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 DOK6Q6PKX4 331 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 AGTRAPQ6RW13 159 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PRR23BQ6ZRT6 265 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CHST9Q7L1S5 443 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 C11orf96Q7Z7L8 435 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 BBS7Q8IWZ6 715 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 RNF38Q9H0F5 515 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 TPT1P8Q9HAU6 139 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 RNF11Q9Y3C5 154 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 LOC100506127A0A0U1RQW1 187 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 MROH6A6NGR9 719 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 G3V2T6 193 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PITPNM1O00562 1244 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 DDX5P17844 614 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 KDELR2P33947 212 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CD47Q08722 323 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 LRRC66Q68CR7 880 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CAPN13Q6MZZ7 669 aaPredicted RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 LETMD1Q6P1Q0 360 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 FAM81AQ8TBF8 368 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC22A17Q8WUG5 538 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMIGD2Q96BF3 282 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PLEKHA8Q96JA3 519 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 EPB41L1Q9H4G0 881 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 RERGLQ9H628 205 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PREBQ9HCU5 417 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TIMMDC1Q9NPL8 285 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms