RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 WACQ9BTA9 647 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 PRKD2Q9BZL6 878 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 LHPPQ9H008 270 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 SMOXQ9NWM0 555 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 DAGLAQ9Y4D2 1042 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 PPP1R2P9O14990 202 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 MLNP12872 115 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 GCAP28676 217 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 WEE1P30291 646 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 SSTR3P32745 418 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 CNTN1Q12860 1018 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 MRNIPQ6NTE8 343 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 FBXO11Q86XK2 927 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 SKA3Q8IX90 412 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 GPRASP2Q96D09 838 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 HOXD1Q9GZZ0 328 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 SDHAF3Q9NRP4 125 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 NOD1Q9Y239 953 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 SNCAIPQ9Y6H5 919 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 A0A1B0GVC2 190 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 ERI2A8K979 691 aaKnown RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 APOC4-APOC2K7ER74 178 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 FANCGO15287 622 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 GCATO75600 419 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 APOC2P02655 101 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 CHI3L1P36222 383 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 TATDN3Q17R31 274 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 HCAR2Q8TDS4 363 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 TNFRSF25Q93038 417 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 RANGRFQ9HD47 186 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 ICKQ9UPZ9 632 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 hCG_1807616A0A1W2PRN6 198 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 HACD1B0YJ81 288 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 AIPO00170 330 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 SIGLEC6O43699 453 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 CCNB2O95067 398 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 MAMLD1Q13495 774 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 FAM214AQ32MH5 1076 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 FAM182AQ5T1J6 154 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 KCNMB3Q9NPA1 279 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 SLC38A7Q9NVC3 462 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM181Q9P2C4 612 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 ARHGAP28Q9P2N2 729 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 PACSIN3Q9UKS6 424 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 PCDHGA1Q9Y5H4 931 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 FMO3P31513 532 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 ANTXR2P58335 489 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 BLOC1S1P78537 153 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 MXD4Q14582 209 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 LBHQ53QV2 105 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF790Q6PG37 636 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 GALNT5Q7Z7M9 940 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 METTL23Q86XA0 190 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 TNS4Q8IZW8 715 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 THRSPQ92748 146 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 PRMT6Q96LA8 375 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 ACBD6Q9BR61 282 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 CHST12Q9NRB3 414 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 LRRC72A6NJI9 287 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 BAG6P46379 1132 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 OMPP47874 163 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 PCP4P48539 62 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 LAPTM5Q13571 262 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 USP45Q70EL2 814 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 VPS25Q9BRG1 176 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 ZCCHC2Q9C0B9 1178 aaKnown RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM185BQ9H7F4 350 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 RPF1Q9H9Y2 349 aaKnown RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 TBC1D22BQ9NU19 505 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 KIAA1551Q9HCM1 1747 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 CIB4A0PJX0 185 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 DPP6P42658 865 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 SEC23BQ15437 767 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 FAM189A2Q15884 450 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 TCEAL5Q5H9L2 206 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 BBS12Q6ZW61 710 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 ARMCX2Q7L311 632 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 CPXCR1Q8N123 301 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 IL17REQ8NFR9 667 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 CERKQ8TCT0 537 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 ACOT11Q8WXI4 607 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 ACDQ96AP0 544 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 TEFMQ96QE5 360 aaKnown RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 TREX2Q9BQ50 279 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 PBDC1Q9BVG4 233 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 MTG2Q9H4K7 406 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 ABCB8Q9NUT2 735 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM248Q9NWD8 314 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 FRMPD2Q68DX3 1309 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 GNG14A0A1W2PPG7 69 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 SLC2A4P14672 509 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 S100A3P33764 101 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 RGS1Q08116 209 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 METTL11BQ5VVY1 283 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 HGSNATQ68CP4 663 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 PTRHD1Q6GMV3 140 aaKnown RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 TIFABQ6ZNK6 161 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 PRSS48Q7RTY5 328 aa4.87□□□□□ -1.63
VPS13D-213ENST00000613099 GTPBP8Q8N3Z3 284 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-213ENST00000613099 KIAA1958Q8N8K9 716 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms