RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 NAA11Q9BSU3 229 aaPredicted RBP3.59□□□□□ -1.83
RNU6-88P-201ENST00000606801 TRAF4Q9BUZ4 470 aaPredicted RBP3.59□□□□□ -1.83
RNU6-88P-201ENST00000606801 UPF2Q9HAU5 1272 aaKnown RBP3.59□□□□□ -1.83
RNU6-88P-201ENST00000606801 ZNF334Q9HCZ1 680 aaPredicted RBP3.59□□□□□ -1.83
RNU6-88P-201ENST00000606801 PIH1D3Q9NQM4 214 aaKnown RBP3.59□□□□□ -1.83
RNU6-88P-201ENST00000606801 OLFML3Q9NRN5 406 aa3.59□□□□□ -1.83
RNU6-88P-201ENST00000606801 SERINC1Q9NRX5 453 aa3.59□□□□□ -1.83
RNU6-88P-201ENST00000606801 ABT1Q9ULW3 272 aaKnown RBP3.59□□□□□ -1.83
RNU6-88P-201ENST00000606801 PADI2Q9Y2J8 665 aa3.59□□□□□ -1.83
RNU6-88P-201ENST00000606801 KIF26BQ2KJY2 2108 aa3.59□□□□□ -1.84
RNU6-88P-201ENST00000606801 FAM172BPA6NC97 362 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 NEMP2A6NFY4 417 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 IPO8O15397 1037 aaKnown RBP3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 SLC22A3O75751 556 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 IGHV2-70P01814 119 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 NR3C1P04150 777 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 IGHV4-38-2P0DP08 117 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 CX3CL1P78423 397 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 RBPJQ06330 500 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 LGALS3BPQ08380 585 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 ASPRV1Q53RT3 343 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 KRBOX4Q5JUW0 171 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 ARMC4Q5T2S8 1044 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 KRT80Q6KB66 452 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 SLC27A1Q6PCB7 646 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 USP43Q70EL4 1123 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 SLC26A9Q7LBE3 791 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 LRRC8CQ8TDW0 803 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 CNDP2Q96KP4 475 aaKnown RBP3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 ZNF354BQ96LW1 612 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 FER1L6-AS2Q96M78 137 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 MUS81Q96NY9 551 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 FNBP1Q96RU3 617 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 FEVQ99581 238 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 ZCCHC17Q9NP64 241 aaKnown RBP3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 CFDP1Q9UEE9 299 aaPredicted RBP3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 SLC24A2Q9UI40 661 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 ICAM5Q9UMF0 924 aa3.58□□□□□ -1.84
RNU6-88P-201ENST00000606801 IGLV9-49A0A0B4J1Y8 123 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 A0A1W2PPK0 400 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 A0A1W2PRB8 838 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 DUXAA6NLW8 204 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 LIFP15018 202 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 AZGP1P25311 298 aaKnown RBP3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 EEF1DP29692 281 aaKnown RBP3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 SLC6A6P31641 620 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 MTHFRP42898 656 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 RAB28P51157 221 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 ZNF41P51814 821 aaPredicted RBP3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 MAPK12P53778 367 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 CDH11P55287 796 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 RPS18P62269 152 aaKnown RBP3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 ZNF415Q09FC8 603 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 CAMK2DQ13557 499 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 COG2Q14746 738 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 CA9Q16790 459 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 XKR3Q5GH77 459 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 CST9LP1Q5W188 147 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 SUSD1Q6UWL2 747 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 NUP54Q7Z3B4 507 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 TRPT1Q86TN4 253 aaKnown RBP3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 TMEM139Q8IV31 216 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 MAML2Q8IZL2 1156 aaPredicted RBP3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 BMPERQ8N8U9 685 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 LMNTD1Q8N9Z9 388 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 SLC4A11Q8NBS3 891 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 OR1J1Q8NGS3 322 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 SSMEM1Q8WWF3 244 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 HDAC11Q96DB2 347 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 NUP85Q9BW27 656 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 LAT2Q9GZY6 243 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 S1PR5Q9H228 398 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 DPP3Q9NY33 737 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 SLC7A7Q9UM01 511 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 MYH15Q9Y2K3 1946 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 LIPGQ9Y5X9 500 aa3.57□□□□□ -1.84
RNU6-88P-201ENST00000606801 DNM1LO00429 736 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 CIDEAO60543 219 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 RNASEH1O60930 286 aaKnown RBP3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 ATP5BP06576 529 aaKnown RBP3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 APOA4P06727 396 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 CD48P09326 243 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 ERVK-10P10266 1014 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 HSPA8P11142 646 aaKnown RBP3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 CD22P20273 847 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 CA4P22748 312 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 PCGF2P35227 344 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 CCR10P46092 362 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 ZNF75DP51815 510 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 PRKCZQ05513 592 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 PPIGQ13427 754 aaKnown RBP eCLIP3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 HYAL4Q2M3T9 481 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 ITPRIPL2Q3MIP1 535 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 ARMC3Q5W041 872 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 PLA2G4FQ68DD2 849 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 MFSD12Q6NUT3 480 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 RBMS3Q6XE24 437 aaKnown RBP3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 ZBTB49Q6ZSB9 765 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 CHST3Q7LGC8 479 aa3.56□□□□□ -1.84
RNU6-88P-201ENST00000606801 ZNF554Q86TJ5 538 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms