RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 BMP2P12643 396 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 POU2F1P14859 743 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 KLHL23Q8NBE8 558 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 ZNF420Q8TAQ5 688 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 FAR1Q8WVX9 515 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 TMEM181Q9P2C4 612 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 ADAMTSL1Q8N6G6 1762 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 MBLAC1A4D2B0 266 aaPredicted RBP16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 ATG13O75143 517 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 CHRNA1P02708 482 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 CLCN2P51788 898 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 FOXA1P55317 472 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 OLR1P78380 273 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 MTSS1LQ765P7 747 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 ARHGAP12Q8IWW6 846 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 PEX13Q92968 403 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 CHCHD6Q9BRQ6 235 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 FAM83DQ9H4H8 585 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 TREX1Q9NSU2 369 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 UBAP1Q9NZ09 502 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 HTR1EP28566 365 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 RFC2P35250 354 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 CASP9P55211 416 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 OR4D2P58180 307 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 ZNF829Q3KNS6 432 aaPredicted RBP16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 ATAD3BQ5T9A4 648 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 LCN8Q6JVE9 175 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 LOC110117498-PIK3R3F6TDL0 507 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 HAS3O00219 553 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 TFPTP0C1Z6 253 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 NR2F1P10589 423 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 HSD17B1P14061 328 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 ENGP17813 658 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 C2orf80Q0P641 193 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 MOGQ16653 247 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 SH2D5Q6ZV89 423 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 C2orf73Q8N5S3 287 aaPredicted RBP16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 TIFAQ96CG3 184 aa16.77■□□□□ 0.28
SMARCA4-215ENST00000590574 TALDO1P37837 337 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 LRP8Q14114 963 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 LAPTM4AQ15012 233 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 ZNF57Q68EA5 555 aaPredicted RBP16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 KCTD11Q693B1 232 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 PSAPL1Q6NUJ1 521 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 ZNF598Q86UK7 904 aaKnown RBP16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 SLC34A3Q8N130 599 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 C3orf58Q8NDZ4 430 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 PYURFQ96I23 114 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 MYRFLQ96LU7 910 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 COPS4Q9BT78 406 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 SLC32A1Q9H598 525 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 CMTM6Q9NX76 183 aa16.77■□□□□ 0.27
SMARCA4-215ENST00000590574 ADAMDEC1O15204 470 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 NTSP30990 170 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 MAGEA11P43364 429 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 PTGR1Q14914 329 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 KDELC1Q6UW63 502 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 CNTN4Q8IWV2 1026 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 VANGL1Q8TAA9 524 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 DUSP26Q9BV47 211 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 H0YAE9 185 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 H3BM21 787 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 CLIC1O00299 241 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 TSC22D2O75157 780 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 IFNGR2P38484 337 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 LUZP2Q86TE4 346 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 KCNN1Q92952 543 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 GTPBP3Q969Y2 492 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 STMN3Q9NZ72 180 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 TMEM9Q9P0T7 183 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 ITGB1BP2Q9UKP3 347 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 ASF1AQ9Y294 204 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 SLC22A1O15245 554 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 DFNA5O60443 496 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 DIRAS1O95057 198 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 ZNF865P0CJ78 1059 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 CRHR2Q13324 411 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 GPR33Q49SQ1 333 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 LSMEM2Q8N112 164 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 DRAXINQ8NBI3 349 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 PHF21AQ96BD5 680 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 ABHD8Q96I13 439 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 ANKRD60Q9BZ19 345 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 PCDHB3Q9Y5E6 796 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 EFCAB9A8MZ26 197 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 PGLSO95336 258 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 PENKP01210 267 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 ARSAP15289 507 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 MYF6P23409 242 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 GABRB3P28472 473 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 DNAJA1P31689 397 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 MANFP55145 182 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 PLA2G4EQ3MJ16 856 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 OR2T5Q6IEZ7 315 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 FAM171BQ6P995 826 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 OR2T29Q8NH02 315 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 CD244Q9BZW8 370 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 ATP6V1HQ9UI12 483 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 RBMX2Q9Y388 322 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 NUMBLQ9Y6R0 609 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms