RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 KCTD6Q8NC69 237 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 JOSD2Q8TAC2 188 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 AGAP11Q8TF27 550 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 MAIP1Q8WWC4 291 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 PSMF1Q92530 271 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 CXorf40BQ96DE9 158 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 THOC3Q96J01 351 aaKnown RBP5.88□□□□□ -1.47
VPS25-204ENST00000589577 COX4I2Q96KJ9 171 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 LMF1Q96S06 567 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 NAP1L3Q99457 506 aaPredicted RBP5.88□□□□□ -1.47
VPS25-204ENST00000589577 NAPGQ99747 312 aaPredicted RBP5.88□□□□□ -1.47
VPS25-204ENST00000589577 FERMT1Q9BQL6 677 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 MAK16Q9BXY0 300 aaKnown RBP5.88□□□□□ -1.47
VPS25-204ENST00000589577 LACRTQ9GZZ8 138 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 OR2AG1Q9H205 316 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 LRFN1Q9P244 771 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 TRIM10Q9UDY6 481 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 REXO2Q9Y3B8 237 aaKnown RBP5.88□□□□□ -1.47
VPS25-204ENST00000589577 A0A1W2PQ67 120 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 TCRBV5S1A1TA0A578 114 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 LRRD1A4D1F6 860 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 ESPNB1AK53 854 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 H3BRJ5 948 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 ZRANB2O95218 330 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS25-204ENST00000589577 ZWINTO95229 277 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 RASAL1O95294 804 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 FTCDO95954 541 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 CRYABP02511 175 aaKnown RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 HOXD4P09016 255 aaPredicted RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 ST6GAL1P15907 406 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 TCP1P17987 556 aaKnown RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 ITGAXP20702 1163 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 AGXTP21549 392 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 COMTP21964 271 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 DNASE1P24855 282 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 CTNNA2P26232 953 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 MIPP30301 263 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 SERPINB6P35237 376 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 SPAM1P38567 509 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 PAFAH1B1P43034 410 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 LMAN1P49257 510 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 CDH6P55285 790 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 TPI1P60174 286 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 ARG2P78540 354 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 ADCY2Q08462 1091 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 DMPKQ09013 629 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 MYBPHQ13203 477 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 RFTN1Q14699 578 aaPredicted RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 LBRQ14739 615 aaKnown RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 PDK2Q15119 407 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 PPP6R3Q5H9R7 873 aaPredicted RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 PPP1R15BQ5SWA1 713 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 ERMARDQ5T6L9 678 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 CES4AQ5XG92 561 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 KLHL35Q6PF15 583 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 FGD2Q7Z6J4 655 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 DOLPP1Q86YN1 238 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 FAM20CQ8IXL6 584 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 CARFQ8N187 725 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 OR11G2Q8NGC1 345 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 KIF18AQ8NI77 898 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 THAP3Q8WTV1 239 aaPredicted RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 TEKT4Q8WW24 435 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 HSPH1Q92598 858 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 ZNF592Q92610 1267 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 MAGED4Q96JG8 741 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 BTBD6Q96KE9 485 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 C16orf45Q96MC5 204 aaPredicted RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 NUDCD1Q96RS6 583 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 MGME1Q9BQP7 344 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 GPATCH1Q9BRR8 931 aaKnown RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 TIMM29Q9BSF4 260 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 POLDIP3Q9BY77 421 aaKnown RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 UCK2Q9BZX2 261 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 TSPAN10Q9H1Z9 355 aaPredicted RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 DHX35Q9H5Z1 703 aaKnown RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 CATSPERBQ9H7T0 1116 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 FANCEQ9HB96 536 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 HAUS2Q9NVX0 235 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 HRASLS2Q9NWW9 162 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 DHCR7Q9UBM7 475 aaKnown RBP5.87□□□□□ -1.47
VPS25-204ENST00000589577 PCSK1NQ9UHG2 260 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 POMT2Q9UKY4 750 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 AP4E1Q9UPM8 1137 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 HYOU1Q9Y4L1 999 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 ALG6Q9Y672 507 aa5.87□□□□□ -1.47
VPS25-204ENST00000589577 A0A0J9YYE9 177 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 GOLGA6L10A0A0M3HER8 536 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 C17orf113A0A1B0GUU1 675 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 GRID2IPA4D2P6 1211 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 OR6C74A6NCV1 312 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 RCCD1A6NED2 376 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 ARHGAP42A6NI28 874 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 FAM90A27PA6NNH2 459 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 E7EQ34 232 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 E9PLN8 166 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 EEF2KO00418 725 aaKnown RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 KMOO15229 486 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 FGF10O15520 208 aaPredicted RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 VEGFDO43915 354 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms