RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 COA3Q9Y2R0 106 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PCM1Q15154 2024 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 MST1RQ04912 1400 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TMEM210A6NLX4 147 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ZNF729A6NN14 1252 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 I3L521 148 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 F2RL2O00254 374 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 NFIBO00712 420 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 GPR171O14626 319 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ANGPT2O15123 496 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 CLDN3O15551 220 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 HUS1O60921 280 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 IPO13O94829 963 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 LYPLA2O95372 231 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 RBP1P09455 135 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 THEGLP0DJG4 465 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PRF1P14222 555 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 NPPBP16860 134 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 EEF1DP29692 281 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ERP29P30040 261 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 RAP1GAPP47736 663 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ZNF200P98182 395 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ZNF33AQ06730 810 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 INCA1Q0VD86 236 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 SCAPQ12770 1279 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ILF2Q12905 390 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PSMD5Q16401 504 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ZNF181Q2M3W8 571 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 FAM160B1Q5W0V3 765 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 STEAP3Q658P3 488 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 BHLHB9Q6PI77 547 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TFAP2EQ6VUC0 442 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ETV3LQ6ZN32 361 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 RNF111Q6ZNA4 994 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 CFAP77Q6ZQR2 320 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TRMT10CQ7L0Y3 403 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 GPR149Q86SP6 731 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 NOXA1Q86UR1 476 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TAC4Q86UU9 113 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TBC1D10CQ8IV04 446 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 DSELQ8IZU8 1212 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PQLC1Q8N2U9 271 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 SLC43A2Q8N370 569 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 SLC24A4Q8NFF2 622 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 HUS1BQ8NHY5 278 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 RAB2BQ8WUD1 216 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 STAMQ92783 540 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 CPNE4Q96A23 557 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 FUBP1Q96AE4 644 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 C18orf25Q96B23 403 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 FAM120BQ96EK7 910 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PGAP3Q96FM1 320 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 VCPIP1Q96JH7 1222 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 RNF170Q96K19 258 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 LBHD1Q9BQE6 289 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 SLAMF7Q9NQ25 335 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 FBXO8Q9NRD0 319 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 C1GALT1Q9NS00 363 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 RCOR3Q9P2K3 495 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ABCD2Q9UBJ2 740 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 KCND3Q9UK17 655 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PSME2Q9UL46 239 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 HSPE1-MOB4S4R3N1 261 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 QRICH2Q9H0J4 1663 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 FAM47DPA6NHR8 397 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 A8MUA0 341 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 PDZK1P1A8MUH7 402 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 PDHXO00330 501 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 AKAP8O43823 692 aaKnown RBP5.53□□□□□ -1.52
LINC01538-201ENST00000588074 RASAL1O95294 804 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 MATN4O95460 622 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 CCNE2O96020 404 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 TNNC2P02585 160 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 LCKP06239 509 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 CD63P08962 238 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 QDPRP09417 244 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 FBP1P09467 338 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 HSPD1P10809 573 aaKnown RBP5.53□□□□□ -1.52
LINC01538-201ENST00000588074 IL7P13232 177 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 C6P13671 934 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 EGR1P18146 543 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 CYP2A7P20853 494 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 CALML3P27482 149 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 CD40LGP29965 261 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 CDC25AP30304 524 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 ACTR1BP42025 376 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 DIO1P49895 249 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 CYP27A1Q02318 531 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 KLRC3Q07444 240 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 CAMK1Q14012 370 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 PON3Q15166 354 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 DPYSL2Q16555 572 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 TMEM31Q5JXX7 168 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 UBXN11Q5T124 520 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 DCAF12L1Q5VU92 463 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 MTFR2Q6P444 385 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 FDX2Q6P4F2 183 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 SHC4Q6S5L8 630 aa5.53□□□□□ -1.52
LINC01538-201ENST00000588074 ZNF574Q6ZN55 896 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms