RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	ZNF517	Q6ZMY9	492 aa	Predicted RBP	5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	ZNF704	Q6ZNC4	412 aa	Predicted RBP	5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	KCTD9	Q7L273	389 aa		5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	NUP54	Q7Z3B4	507 aa		5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	COMMD2	Q86X83	199 aa		5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	CLYBL	Q8N0X4	340 aa		5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	NRAC	Q8N912	160 aa		5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	SPATA22	Q8NHS9	363 aa		5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	RIT1	Q92963	219 aa		5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	OR1F2P	Q96R84	312 aa		5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	CACNG6	Q9BXT2	260 aa		5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	KLHL1	Q9NR64	748 aa		5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	IARS2	Q9NSE4	1012 aa	Known RBP	5.21	□□□□□ -1.58
TUBD1-208	ENST00000588009	TTC3	P53804	2025 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	MED19	A0JLT2	244 aa	Predicted RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	SMIM30	A4D0T7	59 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	C19orf81	C9J6K1	198 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	ZBTB14	O43829	449 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	FCGR3B	O75015	233 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	KDM4B	O94953	1096 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	WDPCP	O95876	746 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	SMIM18	P0DKX4	95 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	SPP1	P10451	314 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	UROS	P10746	265 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	POLR2C	P19387	275 aa	Predicted RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	CD27	P26842	260 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	RGS7	P49802	495 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	ADAR	P55265	1226 aa	Known RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	ISL1	P61371	349 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	MAT1A	Q00266	395 aa	Known RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	TEF	Q10587	303 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	KLF9	Q13886	244 aa	Predicted RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	SLC39A14	Q15043	492 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	CALCRL	Q16602	461 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	SETMAR	Q53H47	684 aa	Predicted RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	SYT14P1	Q58G82	188 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	RAB12	Q6IQ22	244 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	TRNP1	Q6NT89	227 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	C8orf82	Q6P1X6	216 aa	Predicted RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	CASC4	Q6P4E1	433 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	CNST	Q6PJW8	725 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	NRARP	Q7Z6K4	114 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	TECPR1	Q7Z6L1	1165 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	FJX1	Q86VR8	437 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	FOXP4	Q8IVH2	680 aa	Predicted RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	SRRM1	Q8IYB3	904 aa	Known RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	ARHGAP24	Q8N264	748 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	B4GALNT2	Q8NHY0	566 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	FAM216A	Q8WUB2	273 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	SLC20A1	Q8WUM9	679 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	TMEM255B	Q8WV15	326 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	RPL36AL	Q969Q0	106 aa	Known RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	ZG16B	Q96DA0	208 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	SCMH1	Q96GD3	660 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	SERINC1	Q9NRX5	453 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	AKAP7	Q9P0M2	348 aa	Predicted RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	C11orf21	Q9P2W6	132 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	B3GAT1	Q9P2W7	334 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	LRWD1	Q9UFC0	647 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	SIX4	Q9UIU6	781 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	MTUS1	Q9ULD2	1270 aa		5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	ISY1	Q9ULR0	285 aa	Known RBP	5.2	□□□□□ -1.58
TUBD1-208	ENST00000588009	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	ZCWPW2	A0A1B0GU75	182 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009		A0A1W2PPK0	400 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009		A0A1W2PPW3	197 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	SDR42E2	A6NKP2	422 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	DUXA	A6NLW8	204 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	SOCS2	O14508	198 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	PPIP5K2	O43314	1243 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	LUC7L3	O95232	432 aa	Known RBP	5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	SLC16A8	O95907	504 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	GLUD1	P00367	558 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	FAM106CP	P0CH98	169 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	P4HA1	P13674	534 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	EPCAM	P16422	314 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	GM2A	P17900	193 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	PTGER4	P35408	488 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	HSD17B3	P37058	310 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	GLUD2	P49448	558 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	MFAP3	P55082	362 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	NME5	P56597	212 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	YBEY	P58557	167 aa	Predicted RBP	5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	KIAA1024L	P59773	190 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	ZNF234	Q14588	700 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	SMC1A	Q14683	1233 aa	Known RBP	5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	FUT11	Q495W5	492 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	ZNF789	Q5FWF6	425 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	RAD9B	Q6WBX8	426 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	ARHGAP22	Q7Z5H3	698 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	PTOV1	Q86YD1	416 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	ZNF619	Q8N2I2	560 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	VANGL1	Q8TAA9	524 aa	Predicted RBP	5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	DHX58	Q96C10	678 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	RAD9A	Q99638	391 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	THAP9	Q9H5L6	903 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	ACKR4	Q9NPB9	350 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	SMARCAL1	Q9NZC9	954 aa		5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	PA2G4	Q9UQ80	394 aa	Known RBP	5.19	□□□□□ -1.58
TUBD1-208	ENST00000588009	OR2W1	Q9Y3N9	320 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms