RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 PPP3R2Q96LZ3 170 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 CCDC138Q96M89 665 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 ACTR8Q9H981 624 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 EBF2Q9HAK2 575 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 ZIM2Q9NZV7 527 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 GULP1Q9UBP9 304 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 CCL27Q9Y4X3 112 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 MTCH2Q9Y6C9 303 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 IGLON5A6NGN9 336 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 H3BM21 787 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 MANBAO00462 879 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 FFAR3O14843 346 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 GPR42O15529 346 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 RGS14O43566 566 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 ULK1O75385 1050 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 DPP6P42658 865 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 THOP1P52888 689 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 RPS14P62263 151 aaKnown RBP21.72■■□□□ 1.07
CIRBP-208ENST00000586548 PLOD1Q02809 727 aaPredicted RBP21.72■■□□□ 1.07
CIRBP-208ENST00000586548 AGERQ15109 404 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 AAGABQ6PD74 315 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 BLOC1S3Q6QNY0 202 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 TRIM46Q7Z4K8 759 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 CACUL1Q86Y37 369 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 FBXO15Q8NCQ5 510 aaPredicted RBP21.72■■□□□ 1.07
CIRBP-208ENST00000586548 USP7Q93009 1102 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 MAGEB10Q96LZ2 347 aaPredicted RBP21.72■■□□□ 1.07
CIRBP-208ENST00000586548 C1orf50Q9BV19 199 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 STOML1Q9UBI4 398 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 COL4A2P08572 1712 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 PCDH8O95206 1070 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 KRT6AP02538 564 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 KRT6BP04259 564 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 NTSR1P30989 418 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 CTHP32929 405 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 KRT6CP48668 564 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 CCNIQ14094 377 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 AAK1Q2M2I8 961 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 PNCKQ6P2M8 343 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 NEK5Q6P3R8 708 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 KLHDC8AQ8IYD2 350 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 L3MBTL4Q8NA19 623 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 PLA2G15Q8NCC3 412 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 HBEGFQ99075 208 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 GABRG3Q99928 467 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 FBRSQ9HAH7 460 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 MRPL40Q9NQ50 206 aaKnown RBP21.72■■□□□ 1.07
CIRBP-208ENST00000586548 CROTQ9UKG9 612 aa21.72■■□□□ 1.07
CIRBP-208ENST00000586548 ANGPT2O15123 496 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 ANP32DO95626 131 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 ZNF8P17098 575 aaPredicted RBP21.71■■□□□ 1.07
CIRBP-208ENST00000586548 CAPN3P20807 821 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 ME2P23368 584 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 PDHA2P29803 388 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 PFN3P60673 137 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 AP2B1P63010 937 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 SLC34A1Q06495 639 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 CEACAM7Q14002 265 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 AP5B1Q2VPB7 878 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 SDE2Q6IQ49 451 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 C8orf82Q6P1X6 216 aaPredicted RBP21.71■■□□□ 1.07
CIRBP-208ENST00000586548 ZNF547Q8IVP9 402 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 CFAP206Q8IYR0 622 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 HM13Q8TCT9 377 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 KCNV2Q8TDN2 545 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 SERGEFQ9UGK8 458 aa21.71■■□□□ 1.07
CIRBP-208ENST00000586548 ZNF490Q9ULM2 529 aaPredicted RBP21.71■■□□□ 1.07
CIRBP-208ENST00000586548 KCNE1BA0A087WTH5 132 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 A0A1W2PP55 124 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 SLC22A3O75751 556 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 GCKP35557 465 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 BDKRB1P46663 353 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 MAD2L1Q13257 205 aaPredicted RBP21.7■■□□□ 1.06
CIRBP-208ENST00000586548 RCAN2Q14206 197 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 STARD3Q14849 445 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 HEATR4Q86WZ0 1026 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 OR2L2Q8NH16 312 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 PYCR2Q96C36 320 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 ATG10Q9H0Y0 220 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 SLC52A3Q9NQ40 469 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 STOX2Q9P2F5 926 aaPredicted RBP21.7■■□□□ 1.06
CIRBP-208ENST00000586548 ANGPTL2Q9UKU9 493 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 SLC22A14Q9Y267 594 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 TRPM6Q9BX84 2022 aa21.7■■□□□ 1.06
CIRBP-208ENST00000586548 KRT87PA6NCN2 255 aa21.69■■□□□ 1.06
CIRBP-208ENST00000586548 TRIM38O00635 465 aa21.69■■□□□ 1.06
CIRBP-208ENST00000586548 RNASEH2AO75792 299 aaKnown RBP21.69■■□□□ 1.06
CIRBP-208ENST00000586548 POP7O75817 140 aaKnown RBP21.69■■□□□ 1.06
CIRBP-208ENST00000586548 PCCBP05166 539 aa21.69■■□□□ 1.06
CIRBP-208ENST00000586548 ITPKAP23677 461 aa21.69■■□□□ 1.06
CIRBP-208ENST00000586548 TEAD1P28347 426 aa21.69■■□□□ 1.06
CIRBP-208ENST00000586548 ZFP36L2P47974 494 aaKnown RBP21.69■■□□□ 1.06
CIRBP-208ENST00000586548 KCNK10P57789 538 aa21.69■■□□□ 1.06
CIRBP-208ENST00000586548 WSCD2Q2TBF2 565 aa21.69■■□□□ 1.06
CIRBP-208ENST00000586548 VPS26BQ4G0F5 336 aa21.69■■□□□ 1.06
CIRBP-208ENST00000586548 TMEM196Q5HYL7 178 aa21.69■■□□□ 1.06
CIRBP-208ENST00000586548 CHRDL2Q6WN34 429 aa21.69■■□□□ 1.06
CIRBP-208ENST00000586548 RETREG3Q86VR2 466 aa21.69■■□□□ 1.06
CIRBP-208ENST00000586548 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.69■■□□□ 1.064e-6■■□□□ 12.7
CIRBP-208ENST00000586548 SPDL1Q96EA4 605 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms