RNA–Protein interactions for RNA: ENST00000584692.1

RHOT1-216, Transcript of ras homolog family member T1, human

TSL 2

Gene RHOT1, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-216	ENST00000584692	NNMT	P40261	264 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	SLC9A3	P48764	834 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	CDH13	P55290	713 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	TPD52	P55327	224 aa	Predicted RBP	4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	B3GALT5-AS1	P59052	145 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	GPR17	Q13304	367 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	ITGA9	Q13797	1035 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	FCN2	Q15485	313 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	GARNL3	Q5VVW2	1013 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	PCGF5	Q86SE9	256 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	COMMD2	Q86X83	199 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	ZNF595	Q8IYB9	648 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	IRGQ	Q8WZA9	623 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	SPACA9	Q96E40	222 aa	Predicted RBP	4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	GCNA	Q96QF7	691 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	ABHD1	Q96SE0	405 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	WNT5B	Q9H1J7	359 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692	KCNK7	Q9Y2U2	307 aa		4.36	□□□□□ -1.71
RHOT1-216	ENST00000584692		A0A087X002	238 aa		4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	ZNF26	P17031	533 aa	Predicted RBP	4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	KCNJ10	P78508	379 aa		4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	DMPK	Q09013	629 aa		4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	ARHGAP24	Q8N264	748 aa		4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	NSL1	Q96IY1	281 aa		4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	FNBP1	Q96RU3	617 aa		4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	TBC1D17	Q9HA65	648 aa		4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	B3GAT1	Q9P2W7	334 aa		4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	MORF4L1	Q9UBU8	362 aa		4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	LRWD1	Q9UFC0	647 aa		4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	PPIE	Q9UNP9	301 aa	Known RBP	4.35	□□□□□ -1.71
RHOT1-216	ENST00000584692	SLCO1B7	G3V0H7	640 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	SH2B2	O14492	632 aa	Predicted RBP	4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	ZNF197	O14709	1029 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	AP2A2	O94973	939 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	LMAN1	P49257	510 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	VEGFC	P49767	419 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	PDX1	P52945	283 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	ERVK11-1	P61568	191 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	TUBB2A	Q13885	445 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	TAF13	Q15543	124 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	SNAPC1	Q16533	368 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	GTDC1	Q4AE62	458 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	C14orf177	Q52M58	125 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	SLC16A9	Q7RTY1	509 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	NPEPL1	Q8NDH3	523 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	ZNF248	Q8NDW4	579 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	DDHD1	Q8NEL9	900 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	CFAP61	Q8NHU2	1237 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	PTER	Q96BW5	349 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	DHX58	Q96C10	678 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	DGAT2	Q96PD7	388 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	TUBB2B	Q9BVA1	445 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	SERINC1	Q9NRX5	453 aa		4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	CPSF2	Q9P2I0	782 aa	Known RBP	4.34	□□□□□ -1.71
RHOT1-216	ENST00000584692	SNED1	Q8TER0	1413 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	PCDH11Y	Q9BZA8	1340 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	STARD3NL	O95772	234 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	CA6	P23280	308 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	DNASE1	P24855	282 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	MATR3	P43243	847 aa	Known RBP eCLIP	4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	LIG4	P49917	911 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	IFI35	P80217	286 aa	Predicted RBP	4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	FFAR4	Q5NUL3	377 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	ZC2HC1B	Q5TFG8	222 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	ZNF790	Q6PG37	636 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	FAM198B	Q6UWH4	519 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	ENOSF1	Q7L5Y1	443 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	PRPF39	Q86UA1	669 aa	Known RBP	4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	ZNF611	Q8N823	705 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	TSPAN14	Q8NG11	270 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	CCDC107	Q8WV48	283 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	HPSE2	Q8WWQ2	592 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	KLHL4	Q9C0H6	718 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	GFRA4	Q9GZZ7	299 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	FGF22	Q9HCT0	170 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	INTS9	Q9NV88	658 aa	Known RBP	4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	INTS10	Q9NVR2	710 aa	Known RBP	4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	DPP3	Q9NY33	737 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	SPHK1	Q9NYA1	384 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	TMEM181	Q9P2C4	612 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	IL17B	Q9UHF5	180 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	ANAPC2	Q9UJX6	822 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	PYGO1	Q9Y3Y4	419 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	RIPK3	Q9Y572	518 aa		4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.33	□□□□□ -1.72
RHOT1-216	ENST00000584692	TRMU	O75648	421 aa	Known RBP	4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	LINGO3	P0C6S8	592 aa		4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	PFKFB1	P16118	471 aa		4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	UBXN2A	P68543	259 aa		4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	MAT1A	Q00266	395 aa	Known RBP	4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	BECN1	Q14457	450 aa		4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	TEAD2	Q15562	447 aa		4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	ITPRIPL2	Q3MIP1	535 aa		4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	BMP2KL	Q5H9B9	411 aa		4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	CYP4A22	Q5TCH4	519 aa		4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	ARHGEF16	Q5VV41	709 aa		4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	PIGZ	Q86VD9	579 aa		4.32	□□□□□ -1.72
RHOT1-216	ENST00000584692	NUDT13	Q86X67	352 aa		4.32	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms