RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 IL26Q9NPH9 171 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 SEMA3GQ9NS98 782 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 TXLNGQ9NUQ3 528 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 ZNF835Q9Y2P0 537 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 PCDHGB6Q9Y5F9 930 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 C2orf74A8MZ97 194 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 CTSBP07858 339 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 FOSL1P15407 271 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 ITGAXP20702 1163 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 DNAJA1P31689 397 aaKnown RBP13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 HMGCLP35914 325 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 ZNF75DP51815 510 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 ZIC1Q15915 447 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 NKG7Q16617 165 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 SLC5A12Q1EHB4 618 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 NCBP2-AS2Q69YL0 99 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 TXNRD3NBQ6F5E7 133 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 SPESP1Q6UW49 350 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 Q6ZPB1 254 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 OVCH1Q7RTY7 1134 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 ZNF655Q8N720 491 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 CNTD1Q8N815 330 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 OR8K1Q8NGG5 319 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 N4BP2L2Q92802 583 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.32□□□□□ -0.289e-6■■■□□ 15.7
CSNK1D-211ENST00000579316 GSX1Q9H4S2 264 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 TFB2MQ9H5Q4 396 aaKnown RBP13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 GPAMQ9HCL2 828 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 TINAGQ9UJW2 476 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 RPH3AQ9Y2J0 694 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 MEMO1Q9Y316 297 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 SPO11Q9Y5K1 396 aa13.32□□□□□ -0.28
CSNK1D-211ENST00000579316 C17orf113A0A1B0GUU1 675 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 AURKAO14965 403 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 PMPCBO75439 489 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 USP1O94782 785 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 RASAL1O95294 804 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 MT-CYBP00156 380 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 HPP00738 406 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 PBLDP30039 288 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 PPP2R2AP63151 447 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 KRT33BQ14525 404 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 LONRF2Q1L5Z9 754 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 DEFB110Q30KQ9 67 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 FNBP1LQ5T0N5 605 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 GPRC6AQ5T6X5 926 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 ZDHHC20Q5W0Z9 365 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 E4F1Q66K89 784 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 ADGRF3Q8IZF5 1079 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 PSMF1Q92530 271 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 TADA1Q96BN2 335 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 IMP4Q96G21 291 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 LINC00615Q96LM1 132 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 CCM2Q9BSQ5 444 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 BPIFA1Q9NP55 256 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 SMOXQ9NWM0 555 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 PLA2G3Q9NZ20 509 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 ACTR10Q9NZ32 417 aa13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 NXT1Q9UKK6 140 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-211ENST00000579316 FN1P02751 2386 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 AKR1B15C9JRZ8 316 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 GPR39O43194 453 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 MFAP3LO75121 409 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 GZMAP12544 262 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 SKILP12757 684 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 FDXRP22570 491 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 IST1P53990 364 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 IFI35P80217 286 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 SLC25A11Q02978 314 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 GSE1Q14687 1217 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 SLC14A2Q15849 920 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 RBBP7Q16576 425 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 BCL7AQ4VC05 210 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 CCDC122Q5T0U0 273 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 COX15Q7KZN9 410 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 ZNF571Q7Z3V5 609 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 AMIGO1Q86WK6 493 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 THAP3Q8WTV1 239 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 PHF10Q8WUB8 498 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 NINJ1Q92982 152 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 TRIM11Q96F44 468 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 DNAJC7Q99615 494 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 NRTNQ99748 197 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 RNF32Q9H0A6 362 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 DEF6Q9H4E7 631 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 SCINQ9Y6U3 715 aa13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 INTS1Q8N201 2190 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-211ENST00000579316 A0A1B0GX78 115 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 TMCO5BA8MYB1 307 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 GOLGA6L6A8MZA4 724 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 UGT1A9O60656 530 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 CD48P09326 243 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 PIM1P11309 404 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 UGT1A6P19224 532 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 MX2P20592 715 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 UGT1A1P22309 533 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 UGT1A4P22310 534 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 SPAM1P38567 509 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms