RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ZBTB2Q8N680 514 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZNF778Q96MU6 729 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 KCTD5Q9NXV2 234 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 PCDHGC4Q9Y5F7 938 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 ROBO1Q9Y6N7 1651 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 FAM172BPA6NC97 362 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 TLR5O60602 858 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 NIPSNAP2O75323 286 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 CCNDBP1O95273 360 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 TCF3P15923 654 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 CYP3A5P20815 502 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 NUP62P37198 522 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 GRIA2P42262 883 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 IL10RBQ08334 325 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 DSC3Q14574 896 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 ACOX1Q15067 660 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 TBRG1Q3YBR2 411 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 KIAA1614Q5VZ46 1190 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 LILRA2Q8N149 483 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 MZB1Q8WU39 189 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 CDKN2AIPNLQ96HQ2 116 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 RANBP9Q96S59 729 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 OSBPL2Q9H1P3 480 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 FAM105AQ9NUU6 356 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 MIOSQ9NXC5 875 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 ARHGEF33A8MVX0 844 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 HCRTO43612 131 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 MT-ND2P03891 347 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 PRG2P13727 222 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 RPL10P27635 214 aaKnown RBP12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 ABRQ12979 859 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 E2F2Q14209 437 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 BHLHB9Q6PI77 547 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 RASSF6Q6ZTQ3 369 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 PIWIL3Q7Z3Z3 882 aaKnown RBP12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 METTL25Q8N6Q8 603 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 C10orf53Q8N6V4 93 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 VANGL1Q8TAA9 524 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 SLC38A4Q969I6 547 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 KIAA1191Q96A73 305 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 QRFPRQ96P65 431 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 AARSD1Q9BTE6 412 aaKnown RBP12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 EBPLQ9BY08 206 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 C11orf16Q9NQ32 467 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 CLIC1O00299 241 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 ITGB1P05556 798 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 MAGEA6P43360 314 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 TUFMP49411 452 aaKnown RBP12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 CENPAP49450 140 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR4D2P58180 307 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 GABARAPL2P60520 117 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 SLC10A7Q0GE19 358 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 TSTQ16762 297 aaKnown RBP12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 WSCD2Q2TBF2 565 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 SPANXN4Q5MJ08 99 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 C6orf136Q5SQH8 315 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 DCST1Q5T197 706 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 BLOC1S3Q6QNY0 202 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 Q6ZNX1 250 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 MFSD2AQ8NA29 543 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 UBE2E3Q969T4 207 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 OSBPL10Q9BXB5 764 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 CPNE5Q9HCH3 593 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 PRDM8Q9NQV8 689 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 KLRG2A4D1S0 409 aaPredicted RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 SLC1A7O00341 560 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 NRP1O14786 923 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 FFAR2O15552 330 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 IRAK2O43187 625 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 ANXA4P09525 319 aaPredicted RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 CXCR3P49682 368 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 BEX3Q00994 111 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 EMX2Q04743 252 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 UNC50Q53HI1 259 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 ALFQ53S48 1182 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 TRIM48Q8IWZ4 208 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 GPR152Q8TDT2 470 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 GTF2A1LQ9UNN4 478 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 ST3GAL5Q9UNP4 418 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 FAM92AA1XBS5 289 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 UGT2B17O75795 530 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 GADD45GO95257 159 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 MAPK8P45983 427 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 C1QTNF8P60827 252 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 ABHD18Q0P651 414 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 HJURPQ8NCD3 748 aaPredicted RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 FRMD6Q96NE9 622 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 SLITRK2Q9H156 845 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 ATP13A3Q9H7F0 1226 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZFYVE1Q9HBF4 777 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 INTS7Q9NVH2 962 aaKnown RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 PTGDR2Q9Y5Y4 395 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZCWPW2A0A1B0GU75 182 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 ATN1P54259 1190 aaPredicted RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 RPS3AP61247 264 aaKnown RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 CES5AQ6NT32 575 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 CARM1Q86X55 608 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR13J1Q8NGT2 312 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms