RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 GOLGA8DPQ0D2H9 430 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 FOXD4Q12950 439 aaPredicted RBP4.86□□□□□ -1.63
KARSP3-201ENST00000571212 IFT88Q13099 833 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 TMED1Q13445 227 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 GBX1Q14549 363 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 STARD3Q14849 445 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 E2F5Q15329 346 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 ASIC2Q16515 512 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 MSANTD2Q6P1R3 559 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 KIAA1324Q6UXG2 1013 aaKnown RBP4.86□□□□□ -1.63
KARSP3-201ENST00000571212 NPNTQ6UXI9 565 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 RAD9BQ6WBX8 426 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 MCOLN2Q8IZK6 566 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 SLC15A4Q8N697 577 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 UBA3Q8TBC4 463 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 SETD7Q8WTS6 366 aaKnown RBP4.86□□□□□ -1.63
KARSP3-201ENST00000571212 CENPIQ92674 756 aaPredicted RBP4.86□□□□□ -1.63
KARSP3-201ENST00000571212 RITA1Q96K30 269 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 PPP1R13BQ96KQ4 1090 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 EIF3CQ99613 913 aaKnown RBP4.86□□□□□ -1.63
KARSP3-201ENST00000571212 MED10Q9BTT4 135 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 CD93Q9NPY3 652 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 ITM2CQ9NQX7 267 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 TLR8Q9NR97 1041 aaKnown RBP4.86□□□□□ -1.63
KARSP3-201ENST00000571212 TM7SF3Q9NS93 570 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.86□□□□□ -1.63
KARSP3-201ENST00000571212 TAS2R14Q9NYV8 317 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 LSM7Q9UK45 103 aaKnown RBP4.86□□□□□ -1.63
KARSP3-201ENST00000571212 SHOC2Q9UQ13 582 aa4.86□□□□□ -1.63
KARSP3-201ENST00000571212 FLNBO75369 2602 aaKnown RBP4.86□□□□□ -1.63
KARSP3-201ENST00000571212 FREM2Q5SZK8 3169 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 MYLKQ15746 1914 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 PTPRQQ9UMZ3 2332 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 A0A087WV48 116 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 SIGLEC16A6NMB1 481 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 EIF4E1BA6NMX2 242 aaKnown RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 YJEFN3A6XGL0 299 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 E5RJQ4 531 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 E7ENQ6 273 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 E9PAM4 449 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 M0QYV0 167 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 BCAT2O15382 392 aaPredicted RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 FLRT2O43155 660 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 IGLV3-27P01718 113 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 MYBL1P10243 752 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 CD19P15391 556 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 PECAM1P16284 738 aaPredicted RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 FPR3P25089 353 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 ADORA2BP29275 332 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 ATP5C1P36542 298 aaKnown RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 TPMTP51580 245 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 TKTL1P51854 596 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 AGFG1P52594 562 aaKnown RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 SLC8A3P57103 927 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 MAMLD1Q13495 774 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 ENPP2Q13822 863 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 FUT11Q495W5 492 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 DCAF12L1Q5VU92 463 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 OTUD1Q5VV17 481 aaPredicted RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 TRNP1Q6NT89 227 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 ALKBH5Q6P6C2 394 aaKnown RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 TMCO3Q6UWJ1 677 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 TPGS1Q6ZTW0 290 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 GALNT15Q8N3T1 639 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 ZCCHC9Q8N567 271 aaKnown RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 RP9Q8TA86 221 aaKnown RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 DENND1AQ8TEH3 1009 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 UCMAQ8WVF2 138 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 C18orf8Q96DM3 657 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 THOC1Q96FV9 657 aaKnown RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 SLC39A13Q96H72 371 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 PIWIL1Q96J94 861 aaKnown RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 RMDN2Q96LZ7 410 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 NPY6RQ99463 290 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 BAG1Q99933 345 aaPredicted RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 GPR174Q9BXC1 333 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 ULBP1Q9BZM6 244 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 MIS12Q9H081 205 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 GAREM1Q9H706 876 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 FAM204AQ9H8W3 233 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 NMUR1Q9HB89 426 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 IL21RQ9HBE5 538 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 THAP10Q9P2Z0 257 aaPredicted RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 STOML2Q9UJZ1 356 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 SLC27A6Q9Y2P4 619 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 MED16Q9Y2X0 877 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 STON1Q9Y6Q2 735 aa4.85□□□□□ -1.63
KARSP3-201ENST00000571212 SETXQ7Z333 2677 aaKnown RBP4.85□□□□□ -1.63
KARSP3-201ENST00000571212 WDFY3Q8IZQ1 3526 aa4.84□□□□□ -1.63
KARSP3-201ENST00000571212 A0A087WUV0 522 aaPredicted RBP4.84□□□□□ -1.63
KARSP3-201ENST00000571212 TRABD2BA6NFA1 517 aa4.84□□□□□ -1.63
KARSP3-201ENST00000571212 C2CD4BA6NLJ0 364 aa4.84□□□□□ -1.63
KARSP3-201ENST00000571212 TMEM233B4DJY2 109 aa4.84□□□□□ -1.63
KARSP3-201ENST00000571212 WASH3PC4AMC7 463 aa4.84□□□□□ -1.63
KARSP3-201ENST00000571212 FAM227AF5H4B4 570 aa4.84□□□□□ -1.63
KARSP3-201ENST00000571212 ZSCAN9O15535 394 aaPredicted RBP4.84□□□□□ -1.63
KARSP3-201ENST00000571212 TNFSF14O43557 240 aa4.84□□□□□ -1.63
KARSP3-201ENST00000571212 SYNCRIPO60506 623 aaKnown RBP4.84□□□□□ -1.63
KARSP3-201ENST00000571212 TBX18O95935 607 aa4.84□□□□□ -1.63
KARSP3-201ENST00000571212 PENKP01210 267 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms