RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 NDOR1Q9UHB4 597 aa6.9□□□□□ -1.3
SMG6-205ENST00000570659 RPL26L1Q9UNX3 145 aaKnown RBP6.9□□□□□ -1.3
SMG6-205ENST00000570659 PLEKHA6Q9Y2H5 1048 aa6.9□□□□□ -1.3
SMG6-205ENST00000570659 ASB1Q9Y576 335 aa6.9□□□□□ -1.3
SMG6-205ENST00000570659 C17orf113A0A1B0GUU1 675 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 FAM221AA4D161 298 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 VSTM2BA6NLU5 285 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 PROM1O43490 865 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 TOXO94900 526 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 AGAP20933 346 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 CD68P34810 354 aaPredicted RBP6.89□□□□□ -1.31
SMG6-205ENST00000570659 GRIA3P42263 894 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 ZNF165P49910 485 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 CDKN1CP49918 316 aaPredicted RBP6.89□□□□□ -1.31
SMG6-205ENST00000570659 TAS2R40P59535 323 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 ADCY2Q08462 1091 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 PAFAH1B3Q15102 231 aaKnown RBP6.89□□□□□ -1.31
SMG6-205ENST00000570659 KRT31Q15323 416 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 SYCP1Q15431 976 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 TUBB8Q3ZCM7 444 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 TCP11X2Q5H9J9 407 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 ATG9BQ674R7 924 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 FCRL6Q6DN72 434 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 HIBCHQ6NVY1 386 aaPredicted RBP6.89□□□□□ -1.31
SMG6-205ENST00000570659 ARMC6Q6NXE6 501 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 KLHL35Q6PF15 583 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 SPESP1Q6UW49 350 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 NPNTQ6UXI9 565 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 TTLL10Q6ZVT0 673 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 CXXC5Q7LFL8 322 aaKnown RBP6.89□□□□□ -1.31
SMG6-205ENST00000570659 OVCH1Q7RTY7 1134 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 TMEM200AQ86VY9 491 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 SPPL2CQ8IUH8 684 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 TMTC1Q8IUR5 882 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 CCDC71Q8IV32 467 aaPredicted RBP6.89□□□□□ -1.31
SMG6-205ENST00000570659 SPNS2Q8IVW8 549 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 RAVER1Q8IY67 606 aaKnown RBP6.89□□□□□ -1.31
SMG6-205ENST00000570659 GDAP1Q8TB36 358 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 CCHCR1Q8TD31 782 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 LCN9Q8WX39 176 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 IMP4Q96G21 291 aaKnown RBP6.89□□□□□ -1.31
SMG6-205ENST00000570659 TSGA13Q96PP4 275 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 LMF1Q96S06 567 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 GORASP1Q9BQQ3 440 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 TRIM51Q9BSJ1 452 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 GPR63Q9BZJ6 419 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 SLC7A5P2Q9GIP4 190 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 SRMSQ9H3Y6 488 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 FAM96AQ9H5X1 160 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 EPS8L2Q9H6S3 715 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 FANCEQ9HB96 536 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 MAGEE1Q9HCI5 957 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 ANKRD10Q9NXR5 420 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 IL17CQ9P0M4 197 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 MYO1AQ9UBC5 1043 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 GPN3Q9UHW5 284 aaPredicted RBP6.89□□□□□ -1.31
SMG6-205ENST00000570659 SERTAD3Q9UJW9 196 aa6.89□□□□□ -1.31
SMG6-205ENST00000570659 MRPS2Q9Y399 296 aaKnown RBP6.89□□□□□ -1.31
SMG6-205ENST00000570659 IGHV3-20A0A0C4DH32 117 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 OR2W5A6NFC9 320 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 MGAT4DA6NG13 374 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 FAM90A27PA6NNH2 459 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 EIF3CLB5ME19 914 aaKnown RBP6.88□□□□□ -1.31
SMG6-205ENST00000570659 NPIPA5E9PKD4 350 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 FAM227AF5H4B4 570 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 DDX3XO00571 662 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMG6-205ENST00000570659 FGFR1OPO95684 399 aaKnown RBP6.88□□□□□ -1.31
SMG6-205ENST00000570659 ONECUT2O95948 504 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 ALAS2P22557 587 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 PTGER1P34995 402 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 CARSP49589 748 aaKnown RBP6.88□□□□□ -1.31
SMG6-205ENST00000570659 KLC1Q07866 573 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 LONRF1Q17RB8 773 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 PDPK2PQ6A1A2 396 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 KDELC1Q6UW63 502 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 UNC5AQ6ZN44 842 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 APTXQ7Z2E3 356 aaKnown RBP6.88□□□□□ -1.31
SMG6-205ENST00000570659 ZNF571Q7Z3V5 609 aaPredicted RBP6.88□□□□□ -1.31
SMG6-205ENST00000570659 DMRTC2Q8IXT2 367 aaPredicted RBP6.88□□□□□ -1.31
SMG6-205ENST00000570659 CFAP206Q8IYR0 622 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 NDUFAF2Q8N183 169 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 CARFQ8N187 725 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 C2orf73Q8N5S3 287 aaPredicted RBP6.88□□□□□ -1.31
SMG6-205ENST00000570659 DNAAF3Q8N9W5 541 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 ACVR1CQ8NER5 493 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 OR5AR1Q8NGP9 310 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 OR2L2Q8NH16 312 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 PROKR1Q8TCW9 393 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 HAS2Q92819 552 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 GPR137Q96N19 417 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 PWWP2AQ96N64 755 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 AGAP3Q96P47 875 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 FERD3LQ96RJ6 166 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 EIF3CQ99613 913 aaKnown RBP6.88□□□□□ -1.31
SMG6-205ENST00000570659 NPIPA1Q9UND3 350 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 MXRA5Q9NR99 2828 aa6.88□□□□□ -1.31
SMG6-205ENST00000570659 TRAV17A0A0B4J275 112 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 ANKRD62A6NC57 917 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 PRAMEF2O60811 474 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 CTSVO60911 334 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms