RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ALAS2P22557 587 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 PTH2RP49190 550 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 SPINT3P49223 89 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 ARSFP54793 590 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 TMPRSS15P98073 1019 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 TNK1Q13470 666 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 TUBA3CQ13748 450 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 SLC39A14Q15043 492 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 OR1C1Q15619 314 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 FAM174BQ3ZCQ3 159 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 ZCWPW2Q504Y3 356 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 PPP1R15BQ5SWA1 713 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 ARMC12Q5T9G4 340 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 LIPNQ5VXI9 398 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 SPINK14Q6IE38 97 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 ARHGAP11AQ6P4F7 1023 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 TUBA3EQ6PEY2 450 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 ARCQ7LC44 396 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 SMYD4Q8IYR2 804 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 MEIOBQ8N635 442 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 POGLUT1Q8NBL1 392 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 LMO3Q8TAP4 145 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 DENND1AQ8TEH3 1009 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 DLG3Q92796 817 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 KREMEN1Q96MU8 473 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 NUDCD1Q96RS6 583 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 YIPF4Q9BSR8 244 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 NAA15Q9BXJ9 866 aaKnown RBP6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 TRIM7Q9C029 511 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 SYNCQ9H7C4 482 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 ARFGAP3Q9NP61 516 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 ACP6Q9NPH0 428 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 RIC8BQ9NVN3 520 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 TMEM160Q9NX00 188 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 KIAA1468Q9P260 1216 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 CTSFQ9UBX1 484 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 NPFFR2Q9Y5X5 522 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 GTPBP10A4D1E9 387 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 ARHGAP42A6NI28 874 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 CETN3O15182 167 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 GPR37O15354 613 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 FZD6O60353 706 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 PRMT3O60678 531 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 CDK14O94921 469 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 ALX3O95076 343 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 CLDN7O95471 211 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 CTSBP07858 339 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 SP1P08047 785 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 KRT5P13647 590 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 TFEBP19484 476 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 HLA-DPA1P20036 260 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 FPR1P21462 350 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 ACVR2AP27037 513 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 SOX5P35711 763 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 HSPA9P38646 679 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 CD96P40200 585 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 ADH7P40394 386 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 GABRB2P47870 512 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 ASCL1P50553 236 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 KLC1Q07866 573 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 POU4F3Q15319 338 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 VWA3BQ502W6 1294 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 RAB6CQ53S08 254 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 RALGPS1Q5JS13 557 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 SLC25A25Q6KCM7 469 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 H3F3CQ6NXT2 135 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 B3GNT6Q6ZMB0 384 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 CENPQQ7L2Z9 268 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 NLRP9Q7RTR0 991 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 PASD1Q8IV76 773 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 ARHGEF19Q8IW93 802 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 BEST3Q8N1M1 668 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 HORMAD2Q8N7B1 307 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 C19orf47Q8N9M1 422 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 MAPK1IP1LQ8NDC0 245 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 OR4E2Q8NGC2 313 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 GPT2Q8TD30 523 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 SLC35C1Q96A29 364 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 SPATA32Q96LK8 384 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 ZNF354BQ96LW1 612 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 SMIM14Q96QK8 99 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 CCL19Q99731 98 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 UTP23Q9BRU9 249 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 BEX2Q9BXY8 128 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 SLC39A8Q9C0K1 460 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 RAB6CQ9H0N0 254 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 ZFYVE1Q9HBF4 777 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 NOD2Q9HC29 1040 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 IMP3Q9NV31 184 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 DTLQ9NZJ0 730 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 IL1RAPL1Q9NZN1 696 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 LPAR3Q9UBY5 353 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 TMEM59LQ9UK28 342 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 HEATR5BQ9P2D3 2071 aa6.28□□□□□ -1.4
HERPUD1-217ENST00000569429 LOC102723996A0A087X1L8 192 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 FIGNL2A6NMB9 653 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 EIF3CLB5ME19 914 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 FAM47E-STBD1D6RA91 191 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms