RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 GPR135Q8IZ08 494 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 OR2Y1Q8NGV0 311 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 N4BP2L2Q92802 583 aaPredicted RBP14.32□□□□□ -0.12
USB1-214ENST00000568848 DCUN1D1Q96GG9 259 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 LINC00615Q96LM1 132 aaPredicted RBP14.32□□□□□ -0.12
USB1-214ENST00000568848 CHP1Q99653 195 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 WDR77Q9BQA1 342 aaPredicted RBP14.32□□□□□ -0.12
USB1-214ENST00000568848 FSD1LQ9BXM9 530 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 SOX17Q9H6I2 414 aaPredicted RBP14.32□□□□□ -0.12
USB1-214ENST00000568848 PIH1D1Q9NWS0 290 aaKnown RBP14.32□□□□□ -0.12
USB1-214ENST00000568848 HACD3Q9P035 362 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 IFNKQ9P0W0 207 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 TDRKHQ9Y2W6 561 aaKnown RBP14.32□□□□□ -0.12
USB1-214ENST00000568848 TACC2O95359 2948 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 PCNX1Q96RV3 2341 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 C2orf74A8MZ97 194 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 ZSCAN9O15535 394 aaPredicted RBP14.31□□□□□ -0.12
USB1-214ENST00000568848 ALPPP05187 535 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 TMEM253P0C7T8 217 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 VARSP26640 1264 aaKnown RBP14.31□□□□□ -0.12
USB1-214ENST00000568848 PSMB4P28070 264 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 RBL1P28749 1068 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 ZNF140P52738 457 aaPredicted RBP14.31□□□□□ -0.12
USB1-214ENST00000568848 CSE1LP55060 971 aaKnown RBP14.31□□□□□ -0.12
USB1-214ENST00000568848 DCDP81605 110 aaKnown RBP14.31□□□□□ -0.12
USB1-214ENST00000568848 Q0VFX4 171 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 CDC16Q13042 620 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 MSLNQ13421 630 aaPredicted RBP14.31□□□□□ -0.12
USB1-214ENST00000568848 BOP1Q14137 746 aaKnown RBP14.31□□□□□ -0.12
USB1-214ENST00000568848 SLC18A3Q16572 532 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 NKAIN1Q4KMZ8 207 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 ZDHHC20Q5W0Z9 365 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 RHBDD2Q6NTF9 364 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 COX15Q7KZN9 410 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 CARFQ8N187 725 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 NXPE1Q8N323 547 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 DNAJB14Q8TBM8 379 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 DTX3LQ8TDB6 740 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 ZFPM2Q8WW38 1151 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 DNAJC1Q96KC8 554 aaKnown RBP14.31□□□□□ -0.12
USB1-214ENST00000568848 QKIQ96PU8 341 aaKnown RBP eCLIP14.31□□□□□ -0.12
USB1-214ENST00000568848 SRPK1Q96SB4 655 aaKnown RBP14.31□□□□□ -0.12
USB1-214ENST00000568848 HEMGNQ9BXL5 484 aa14.31□□□□□ -0.12
USB1-214ENST00000568848 STOX2Q9P2F5 926 aaPredicted RBP14.31□□□□□ -0.12
USB1-214ENST00000568848 KRT87PA6NCN2 255 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 ZNF487B1APH4 448 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 SOCS6O14544 535 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 HNRNPRO43390 633 aaKnown RBP14.3□□□□□ -0.12
USB1-214ENST00000568848 WISP2O76076 250 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 MED26O95402 600 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 EPOP01588 193 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 CHRM5P08912 532 aaPredicted RBP14.3□□□□□ -0.12
USB1-214ENST00000568848 ATP1B2P14415 290 aaPredicted RBP14.3□□□□□ -0.12
USB1-214ENST00000568848 ZFXP17010 805 aaPredicted RBP14.3□□□□□ -0.12
USB1-214ENST00000568848 ALAS2P22557 587 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 MC4RP32245 332 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 ADRA1AP35348 466 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 MPP3Q13368 585 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 TAF1AQ15573 450 aaPredicted RBP14.3□□□□□ -0.12
USB1-214ENST00000568848 SKOR2Q2VWA4 1001 aaPredicted RBP14.3□□□□□ -0.12
USB1-214ENST00000568848 SERPINA9Q86WD7 417 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 PIANPQ8IYJ0 282 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 PRSS58Q8IYP2 241 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 TFGQ92734 400 aaPredicted RBP14.3□□□□□ -0.12
USB1-214ENST00000568848 PTERQ96BW5 349 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 COPS8Q99627 209 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 CCM2Q9BSQ5 444 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 DHRS4Q9BTZ2 278 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 XPO4Q9C0E2 1151 aaKnown RBP14.3□□□□□ -0.12
USB1-214ENST00000568848 TFB2MQ9H5Q4 396 aaKnown RBP14.3□□□□□ -0.12
USB1-214ENST00000568848 ATP13A2Q9NQ11 1180 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 PLA2G3Q9NZ20 509 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.3□□□□□ -0.12
USB1-214ENST00000568848 CTSFQ9UBX1 484 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 CDC23Q9UJX2 597 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 HS3ST3B1Q9Y662 390 aa14.3□□□□□ -0.12
USB1-214ENST00000568848 ITPR3Q14573 2671 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 MTORP42345 2549 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 OR51F1A6NGY5 319 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 AGPSO00116 658 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 SPOPO43791 374 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 NRP2O60462 931 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 KLHL18O94889 574 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 TPH1P17752 444 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 HADHAP40939 763 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 GRIA3P42263 894 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 TNNT3P45378 269 aaPredicted RBP14.29□□□□□ -0.12
USB1-214ENST00000568848 OR1D4P47884 311 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 TAZQ16635 292 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 ODF2Q5BJF6 829 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 SARM1Q6SZW1 724 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 TTLL10Q6ZVT0 673 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 DNAJC22Q8N4W6 341 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 MAGEB10Q96LZ2 347 aaPredicted RBP14.29□□□□□ -0.12
USB1-214ENST00000568848 IL17FQ96PD4 163 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 DPH2Q9BQC3 489 aaPredicted RBP14.29□□□□□ -0.12
USB1-214ENST00000568848 GBA3Q9H227 469 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 SYTL2Q9HCH5 934 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 AGPAT4Q9NRZ5 378 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 TXLNGQ9NUQ3 528 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms