RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-215	ENST00000566682	GIMAP7	Q8NHV1	300 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	CD200R1	Q8TD46	325 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	IFT81	Q8WYA0	676 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	INPP5D	Q92835	1189 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	FAM129A	Q9BZQ8	928 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	L2HGDH	Q9H9P8	463 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	LRRC4C	Q9HCJ2	640 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	ASCL3	Q9NQ33	180 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	SMYD2	Q9NRG4	433 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	OCIAD1	Q9NX40	245 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	KLHL42	Q9P2K6	505 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	ICK	Q9UPZ9	632 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	RUVBL2	Q9Y230	463 aa	Known RBP	13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	PSAT1	Q9Y617	370 aa		13.29	□□□□□ -0.28
SPG7-215	ENST00000566682	TCRBV9S1A1T	A0A576	114 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	CDRT15L2	A8MXV6	281 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	TAF4	O00268	1085 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	BTN3A1	O00481	513 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	TOX3	O15405	576 aa	Predicted RBP	13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	RASSF9	O75901	435 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	MATN4	O95460	622 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	C1orf105	O95561	183 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	ITGA2B	P08514	1039 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	ANKRD34C	P0C6C1	535 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	FGF3	P11487	239 aa	Predicted RBP	13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	ATP5D	P30049	168 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	SEPHS1	P49903	392 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	MAPK10	P53779	464 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	CUL1	Q13616	776 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	KYNU	Q16719	465 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	TBC1D25	Q3MII6	688 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	UGT3A1	Q6NUS8	523 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	STRA8	Q7Z7C7	330 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	SLC26A11	Q86WA9	606 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	PROSER1	Q86XN7	944 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	DCUN1D3	Q8IWE4	304 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	ADGRF3	Q8IZF5	1079 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	LRRN4CL	Q8ND94	238 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	ZNF578	Q96N58	590 aa	Predicted RBP	13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	FOPNL	Q96NB1	174 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	MAP3K3	Q99759	626 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	NSMCE4A	Q9NXX6	385 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	TAS2R13	Q9NYV9	303 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	MTRF1L	Q9UGC7	380 aa	Known RBP	13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	CIDEB	Q9UHD4	219 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	PLAGL1	Q9UM63	463 aa		13.28	□□□□□ -0.28
SPG7-215	ENST00000566682	ADAMTS20	P59510	1910 aa		13.27	□□□□□ -0.28
SPG7-215	ENST00000566682	IGHV5-51	A0A0C4DH38	117 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	GSAP	A4D1B5	854 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	EFCAB7	A8K855	629 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	CXorf49	A8MYA2	514 aa	Predicted RBP	13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	MATN2	O00339	956 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	TLX3	O43711	291 aa	Predicted RBP	13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	KDM1A	O60341	852 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	C1QA	P02745	245 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	RHOXF2B	P0C7M4	288 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	CD9	P21926	228 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	PRDX3	P30048	256 aa	Known RBP	13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	ECHS1	P30084	290 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	SHMT2	P34897	504 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	SKIV2L2	P42285	1042 aa	Known RBP	13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	MLLT3	P42568	568 aa	Predicted RBP	13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	KPNA2	P52292	529 aa	Known RBP	13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	CDKN2D	P55273	166 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	ERVPABLB-1	P60509	514 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	GRB7	Q14451	532 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	CCSMST1	Q4G0I0	132 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	HECTD2	Q5U5R9	776 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	FAM45BP	Q6NSW5	357 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	TTC23L	Q6PF05	361 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	CYHR1	Q6ZMK1	362 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	NEK10	Q6ZWH5	1172 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	PRSS42	Q7Z5A4	293 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	ZC3HC1	Q86WB0	502 aa	Known RBP	13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	FAM129C	Q86XR2	697 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	CPNE9	Q8IYJ1	553 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	GPATCH11	Q8N954	259 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	FAM45A	Q8TCE6	357 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	KLHL6	Q8WZ60	621 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	CDKL2	Q92772	493 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	FGF11	Q92914	225 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	USP7	Q93009	1102 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	RAD51AP1	Q96B01	352 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	CD180	Q99467	661 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	RHOXF2	Q9BQY4	288 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	MENT	Q9BUN1	341 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	ZNF768	Q9H5H4	540 aa	Known RBP	13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	THSD1	Q9NS62	852 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	SEMA5B	Q9P283	1151 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	TRMT6	Q9UJA5	497 aa	Known RBP	13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	ZMIZ1	Q9ULJ6	1067 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	VWA7	Q9Y334	891 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	CEP295	Q9C0D2	2601 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	WDFY3	Q8IZQ1	3526 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	PCM1	Q15154	2024 aa		13.27	□□□□□ -0.29
SPG7-215	ENST00000566682	ASPM	Q8IZT6	3477 aa		13.26	□□□□□ -0.29
SPG7-215	ENST00000566682	PIPSL	A2A3N6	862 aa		13.26	□□□□□ -0.29
SPG7-215	ENST00000566682	TLCD2	A6NGC4	264 aa		13.26	□□□□□ -0.29

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