RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 SLC32A1Q9H598 525 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 PARVBQ9HBI1 364 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 IGLV3-16A0A075B6K0 115 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 PABPN1LA6NDY0 278 aaKnown RBP18.28■□□□□ 0.52
MSLN-207ENST00000566549 DLGAP1O14490 977 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 EI24O14681 340 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 KCNH1O95259 989 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 CLIC3O95833 236 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 POLR2EP19388 210 aaKnown RBP18.28■□□□□ 0.52
MSLN-207ENST00000566549 HTR1EP28566 365 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 POLR2LP62875 67 aaKnown RBP18.28■□□□□ 0.52
MSLN-207ENST00000566549 MAPKAPK3Q16644 382 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 SPATS1Q496A3 300 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 GTDC1Q4AE62 458 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 ELMSAN1Q6PJG2 1045 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 TRIM46Q7Z4K8 759 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 SLC22A15Q8IZD6 547 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 POF1BQ8WVV4 589 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 FIG4Q92562 907 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 NSMCE2Q96MF7 247 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 TRIM4Q9C037 500 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 MUC13Q9H3R2 512 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 FAM83DQ9H4H8 585 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 IKZF5Q9H5V7 419 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 PCDH12Q9NPG4 1184 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 SMOXQ9NWM0 555 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 ERVW-1Q9UQF0 538 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 SLC22A14Q9Y267 594 aa18.28■□□□□ 0.52
MSLN-207ENST00000566549 DYTNA2CJ06 578 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 TMEM202A6NGA9 273 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 ARNTLO00327 626 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 CLGNO14967 610 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 PCNAP12004 261 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 PTPN2P17706 415 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 ARHGAP15Q53QZ3 475 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 NEK5Q6P3R8 708 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 MRPL43Q8N983 215 aaKnown RBP18.27■□□□□ 0.52
MSLN-207ENST00000566549 ST13P5Q8NFI4 369 aaPredicted RBP18.27■□□□□ 0.52
MSLN-207ENST00000566549 OR10A6Q8NH74 314 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 ASB11Q8WXH4 323 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 GTF2H4Q92759 462 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 FOXJ1Q92949 421 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 USP7Q93009 1102 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 TBCDQ9BTW9 1192 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 CHID1Q9BWS9 393 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 ELOVL6Q9H5J4 265 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 DLGAP4Q9Y2H0 992 aa18.27■□□□□ 0.52
MSLN-207ENST00000566549 SEC24DO94855 1032 aaPredicted RBP18.27■□□□□ 0.51
MSLN-207ENST00000566549 B3GALT4O96024 378 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 NPPAP01160 153 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 KRT6AP02538 564 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 KRT6BP04259 564 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 PGRP06401 933 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 CTSLP07711 333 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 BCKDHAP12694 445 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 EPCAMP16422 314 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 KRT6CP48668 564 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 MAD2L1Q13257 205 aaPredicted RBP18.27■□□□□ 0.51
MSLN-207ENST00000566549 GOLM1Q8NBJ4 401 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 TFAP2CQ92754 450 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 CLP1Q92989 425 aaKnown RBP18.27■□□□□ 0.51
MSLN-207ENST00000566549 HEPHQ9BQS7 1158 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 RIOK2Q9BVS4 552 aaKnown RBP18.27■□□□□ 0.51
MSLN-207ENST00000566549 SLC12A9Q9BXP2 914 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 C1orf109Q9NX04 203 aa18.27■□□□□ 0.51
MSLN-207ENST00000566549 KIAA0355O15063 1070 aa18.26■□□□□ 0.51
MSLN-207ENST00000566549 HTRA4P83105 476 aaPredicted RBP18.26■□□□□ 0.51
MSLN-207ENST00000566549 ATP6AP1Q15904 470 aa18.26■□□□□ 0.51
MSLN-207ENST00000566549 INTS11Q5TA45 600 aaKnown RBP18.26■□□□□ 0.51
MSLN-207ENST00000566549 GRASPQ7Z6J2 395 aaPredicted RBP18.26■□□□□ 0.51
MSLN-207ENST00000566549 CYGBQ8WWM9 190 aa18.26■□□□□ 0.51
MSLN-207ENST00000566549 GFM2Q969S9 779 aaKnown RBP18.26■□□□□ 0.51
MSLN-207ENST00000566549 TSSK3Q96PN8 268 aa18.26■□□□□ 0.51
MSLN-207ENST00000566549 C9orf16Q9BUW7 83 aa18.26■□□□□ 0.51
MSLN-207ENST00000566549 ANKRD60Q9BZ19 345 aa18.26■□□□□ 0.51
MSLN-207ENST00000566549 SOX17Q9H6I2 414 aaPredicted RBP18.26■□□□□ 0.51
MSLN-207ENST00000566549 IL23AQ9NPF7 189 aa18.26■□□□□ 0.51
MSLN-207ENST00000566549 TMEM45AQ9NWC5 275 aa18.26■□□□□ 0.51
MSLN-207ENST00000566549 INSL6Q9Y581 213 aa18.26■□□□□ 0.51
MSLN-207ENST00000566549 DENND4CQ5VZ89 1909 aa18.26■□□□□ 0.51
MSLN-207ENST00000566549 ZNF106Q9H2Y7 1883 aaKnown RBP18.26■□□□□ 0.51
MSLN-207ENST00000566549 KANSL1LA0AUZ9 987 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 ACOX3O15254 700 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 LRATO95237 230 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 ZNF23P17027 643 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 IRS1P35568 1242 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 APOFQ13790 326 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 BRAT1Q6PJG6 821 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 ANKRD46Q86W74 232 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 PROSER1Q86XN7 944 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 PHACTR4Q8IZ21 702 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 GALNT15Q8N3T1 639 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 TSPAN14Q8NG11 270 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 MAGEE2Q8TD90 523 aaPredicted RBP18.25■□□□□ 0.51
MSLN-207ENST00000566549 FRS2Q8WU20 508 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 ZNF583Q96ND8 569 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 ADI1Q9BV57 179 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 SLC6A13Q9NSD5 602 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 OLAHQ9NV23 265 aa18.25■□□□□ 0.51
MSLN-207ENST00000566549 MAGEL2Q9UJ55 1249 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms