RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 TLK1Q9UKI8 766 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 ZKSCAN5Q9Y2L8 839 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 TDRKHQ9Y2W6 561 aaKnown RBP19.52■□□□□ 0.72
CLN6-207ENST00000566347 SEC16AO15027 2179 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 BHMG1C9JSJ3 638 aaPredicted RBP19.51■□□□□ 0.71
CLN6-207ENST00000566347 CHRM5P08912 532 aaPredicted RBP19.51■□□□□ 0.71
CLN6-207ENST00000566347 PVRP15151 417 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 UGT2B7P16662 529 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 IL10RAQ13651 578 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 DNAJC21Q5F1R6 531 aaKnown RBP19.51■□□□□ 0.71
CLN6-207ENST00000566347 ZNF662Q6ZS27 426 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 CDHR3Q6ZTQ4 885 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 ASB18Q6ZVZ8 466 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 ZNF534Q76KX8 674 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 PRUNE1Q86TP1 453 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 SYTL1Q8IYJ3 562 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 GPR135Q8IZ08 494 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 MAIP1Q8WWC4 291 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 N4BP2L2Q92802 583 aaPredicted RBP19.51■□□□□ 0.71
CLN6-207ENST00000566347 ZNF778Q96MU6 729 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 OR2A14Q96R47 310 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 KLHL25Q9H0H3 589 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 PCMTD2Q9NV79 361 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 ANAPC5Q9UJX4 755 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 SNX7Q9UNH6 387 aa19.51■□□□□ 0.71
CLN6-207ENST00000566347 DRG1Q9Y295 367 aaKnown RBP19.51■□□□□ 0.71
CLN6-207ENST00000566347 AP3B1O00203 1094 aa19.5■□□□□ 0.71
CLN6-207ENST00000566347 CCDC175P0C221 793 aa19.5■□□□□ 0.71
CLN6-207ENST00000566347 RPL22P35268 128 aaKnown RBP19.5■□□□□ 0.71
CLN6-207ENST00000566347 SIX1Q15475 284 aaPredicted RBP19.5■□□□□ 0.71
CLN6-207ENST00000566347 PCID2Q5JVF3 399 aa19.5■□□□□ 0.71
CLN6-207ENST00000566347 NAPRTQ6XQN6 538 aa19.5■□□□□ 0.71
CLN6-207ENST00000566347 SLC22A15Q8IZD6 547 aa19.5■□□□□ 0.71
CLN6-207ENST00000566347 ENDOVQ8N8Q3 282 aaKnown RBP19.5■□□□□ 0.71
CLN6-207ENST00000566347 TEX19Q8NA77 164 aa19.5■□□□□ 0.71
CLN6-207ENST00000566347 GLIS1Q8NBF1 620 aa19.5■□□□□ 0.71
CLN6-207ENST00000566347 ASZ1Q8WWH4 475 aa19.5■□□□□ 0.71
CLN6-207ENST00000566347 CARD6Q9BX69 1037 aa19.5■□□□□ 0.71
CLN6-207ENST00000566347 CATSPERZQ9NTU4 200 aa19.5■□□□□ 0.71
CLN6-207ENST00000566347 NBASA2RRP1 2371 aa19.5■□□□□ 0.71
CLN6-207ENST00000566347 A0A0J9YY10 115 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 RPN2P04844 631 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 ZSCAN5DPP0CG00 497 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 NR1D1P20393 614 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 CCR7P32248 378 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 TTPAP49638 278 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 FOXK1P85037 733 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 HSPA14Q0VDF9 509 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 KIR2DS3Q14952 304 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 LCN10Q6JVE6 187 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 AP1M1Q9BXS5 423 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 TRIM55Q9BYV6 548 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 IL22Q9GZX6 179 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 LZTFL1Q9NQ48 299 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 ACSS2Q9NR19 701 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 CHRAC1Q9NRG0 131 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 TCFL5Q9UL49 500 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 AP1M2Q9Y6Q5 423 aa19.49■□□□□ 0.71
CLN6-207ENST00000566347 C9J4A7 227 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 PRMT5O14744 637 aaPredicted RBP19.48■□□□□ 0.71
CLN6-207ENST00000566347 ZNF749O43361 778 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 DNAJB5O75953 348 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 APOA4P06727 396 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 TPBGLP0DKB5 382 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 AGXTP21549 392 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 CSE1LP55060 971 aaKnown RBP19.48■□□□□ 0.71
CLN6-207ENST00000566347 SESN2P58004 480 aaPredicted RBP19.48■□□□□ 0.71
CLN6-207ENST00000566347 BASP1P80723 227 aaKnown RBP19.48■□□□□ 0.71
CLN6-207ENST00000566347 SEMA3AQ14563 771 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 TMED2Q15363 201 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 SLC5A12Q1EHB4 618 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 FAM198BQ6UWH4 519 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 GSTA5Q7RTV2 222 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 TRIM73Q86UV7 250 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 MPP5Q8N3R9 675 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 TRIM58Q8NG06 486 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 ADAMTS17Q8TE56 1095 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 C17orf62Q9BQA9 187 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 FAM60AQ9NP50 221 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 SPHK1Q9NYA1 384 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 BFARQ9NZS9 450 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 PADI2Q9Y2J8 665 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 FLNCQ14315 2725 aa19.48■□□□□ 0.71
CLN6-207ENST00000566347 ARGFXA6NJG6 315 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 ISM1B1AKI9 464 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 K7EM74 188 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 CD3EAPO15446 510 aaKnown RBP19.47■□□□□ 0.71
CLN6-207ENST00000566347 GPC4O75487 556 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 OR2B3O76000 313 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 FGGP02679 453 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 CAPN1P07384 714 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 NPY2RP49146 381 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 RAB28P51157 221 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 NCF4Q15080 339 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 PTCHD3Q3KNS1 767 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 CPZQ66K79 652 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 UNC5DQ6UXZ4 953 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 DCUN1D3Q8IWE4 304 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 FLVCR1-AS1Q8TAF5 88 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 DHRS4Q9BTZ2 278 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms