RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 AACSQ86V21 672 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 CDC20BQ86Y33 519 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 PPFIBP2Q8ND30 876 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 OR5M8Q8NGP6 311 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 IRGQQ8WZA9 623 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 CENPTQ96BT3 561 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 LRRC61Q9BV99 259 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 DGCR6LQ9BY27 220 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 UPF3AQ9H1J1 476 aaKnown RBP2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 HRH4Q9H3N8 390 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 ZNF701Q9NV72 531 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 SEPT11Q9NVA2 429 aaKnown RBP2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 LARSQ9P2J5 1176 aaKnown RBP2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 PPP1R3CQ9UQK1 317 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 DFFBO76075 338 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 ACADMP11310 421 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 CAPN2P17655 700 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 TPD52P55327 224 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 RAPSNQ13702 412 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 SQLEQ14534 574 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 PHLDA2Q53GA4 152 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 ZNF343Q6P1L6 599 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 GPRIN3Q6ZVF9 776 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 TMEM139Q8IV31 216 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 EXOC8Q8IYI6 725 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 CEP57L1Q8IYX8 460 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 ADGRF2Q8IZF7 708 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 KIRREL3Q8IZU9 778 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 NIPA2Q8N8Q9 360 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 LRRC59Q96AG4 307 aaKnown RBP2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 FOXN4Q96NZ1 517 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 USP28Q96RU2 1077 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 KRT12Q99456 494 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 GPATCH1Q9BRR8 931 aaKnown RBP2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 FNDC11Q9BVV2 318 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 NUP85Q9BW27 656 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 RTN4RQ9BZR6 473 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 FAM120CQ9NX05 1096 aaKnown RBP2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 NUDT4Q9NZJ9 180 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 CACNG4Q9UBN1 327 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 HACL1Q9UJ83 578 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 TUBE1Q9UJT0 475 aa2.78□□□□□ -1.96
HMGB1P33-201ENST00000563485 A0A087X0M5 115 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 A0A1B0GX30 115 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 PI4KAP2A4QPH2 592 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 PGPEP1LA6NFU8 196 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 LRRC72A6NJI9 287 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 KPNA7A9QM74 516 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 XRCC3O43542 346 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 USO1O60763 962 aaKnown RBP2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 MBD4O95243 580 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 IGHV4-31P0DP07 118 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 GABRA5P31644 462 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 HADHAP40939 763 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 LEPRP48357 1165 aaKnown RBP2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 PAX9P55771 341 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 CXCL9Q07325 125 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 RIGQ13278 110 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 IRF3Q14653 427 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 ITPRIPL2Q3MIP1 535 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 XKR3Q5GH77 459 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 SLC25A53Q5H9E4 307 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 WLSQ5T9L3 541 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 FIGLAQ6QHK4 219 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 HAUS6Q7Z4H7 955 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 COMMD2Q86X83 199 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 CFAP206Q8IYR0 622 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 ARHGAP24Q8N264 748 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 Q8N377 158 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 MOSPD2Q8NHP6 518 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 VANGL1Q8TAA9 524 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 ZNF519Q8TB69 540 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 SMAP2Q8WU79 429 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 PHLDA1Q8WV24 401 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 SLCO2A1Q92959 643 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 BTBD10Q9BSF8 475 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 LMF2Q9BU23 707 aaKnown RBP2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 PITPNM3Q9BZ71 974 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 FGF21Q9NSA1 209 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 PANK4Q9NVE7 773 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 PLAGL1Q9UM63 463 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 ADAMTS9Q9P2N4 1935 aa2.77□□□□□ -1.97
HMGB1P33-201ENST00000563485 ANKRD61A6NGH8 418 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 C15orf61A6NNL5 157 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 EPM2AB3EWF7 344 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 SOCS3O14543 225 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 OR10H2O60403 315 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 MAGEC1O60732 1142 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 RNASEH1O60930 286 aaKnown RBP2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 ZWINTO95229 277 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 WDPCPO95876 746 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 VPREB1P12018 145 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 CYP2A7P20853 494 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 SLC6A6P31641 620 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 CCR10P46092 362 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 MFAP4P55083 255 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 GSCP56915 257 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 HERV-K104P61576 105 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 CDK3Q00526 305 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms