RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 AGXTP21549 392 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PSMA3P25788 255 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 OTX2P32243 289 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SHMT2P34897 504 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CBSP35520 551 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 NSG1P42857 185 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 GSTM4Q03013 218 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 BRD3Q15059 726 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 NAPRTQ6XQN6 538 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 MRGPREQ86SM8 312 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 GPR135Q8IZ08 494 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 DHRS4Q9BTZ2 278 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SPRTNQ9H040 489 aaPredicted RBP16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 ASF1AQ9Y294 204 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PADI2Q9Y2J8 665 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 R3HDM2Q9Y2K5 976 aaKnown RBP16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 BHMG1C9JSJ3 638 aaPredicted RBP16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 ZNF189O75820 626 aaPredicted RBP16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 OR2B3O76000 313 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 AP2A1O95782 977 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CHRM5P08912 532 aaPredicted RBP16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 MSNP26038 577 aaKnown RBP16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 FOXN2P32314 431 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CETN2P41208 172 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 RRADP55042 308 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 FOXL2P58012 376 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 KLF1Q13351 362 aaPredicted RBP16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 MRPL49Q13405 166 aaKnown RBP16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 ITIH4Q14624 930 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 C4orf17Q53FE4 359 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 C1orf189Q5VU69 101 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 RHBDD2Q6NTF9 364 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PACS1Q6VY07 963 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 RAD9BQ6WBX8 426 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 RAB43Q86YS6 212 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 HPS6Q86YV9 775 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 TAB3Q8N5C8 712 aaPredicted RBP16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 ACRBPQ8NEB7 543 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 OR5K2Q8NHB8 316 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 ELMO1Q92556 727 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PNPLA2Q96AD5 504 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 TCTN2Q96GX1 697 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SGSM3Q96HU1 749 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 GBP5Q96PP8 586 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PANX2Q96RD6 677 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CHRNA10Q9GZZ6 450 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SLAMF7Q9NQ25 335 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PLEKHB1Q9UF11 243 aaPredicted RBP16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 G3BP2Q9UN86 482 aaKnown RBP16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PACSIN2Q9UNF0 486 aaPredicted RBP16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PIKFYVEQ9Y2I7 2098 aa16.12■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SLC5A10A0PJK1 596 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PEBP1P30086 187 aaKnown RBP16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 P3H1Q32P28 736 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CCDC38Q502W7 563 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 MLIPQ5VWP3 458 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CRYBG3Q68DQ2 2970 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 HOOK3Q86VS8 718 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 TMEM151BQ8IW70 566 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 TBC1D21Q8IYX1 336 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 OR13J1Q8NGT2 312 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SSC4DQ8WTU2 575 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 N4BP2L2Q92802 583 aaPredicted RBP16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 TMEM121Q9BTD3 319 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 DHCR7Q9UBM7 475 aaKnown RBP16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PLAGL1Q9UM63 463 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 TDRKHQ9Y2W6 561 aaKnown RBP16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 AP1M2Q9Y6Q5 423 aa16.11■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 A0A0J9YY10 115 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 TCRBV7S2A1N4TA0A589 114 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CCDC162PA2VCL2 907 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 GOLGA6L9A6NEM1 432 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 QSOX1O00391 747 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 ZSCAN9O15535 394 aaPredicted RBP16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CNOT3O75175 753 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 FTH1P02794 183 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 ATXN8OSP0DMR3 200 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SSPNQ14714 243 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SLC9A5Q14940 896 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 EIF2S3LQ2VIR3 472 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 TMTC1Q8IUR5 882 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 LURAP1LQ8IV03 231 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 DNAJC22Q8N4W6 341 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 ZNF655Q8N720 491 aaPredicted RBP16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 TTC13Q8NBP0 860 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 OR52K1Q8NGK4 314 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SLC35B2Q8TB61 432 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PROKR1Q8TCW9 393 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 C19orf60Q96EN9 201 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 C17orf62Q9BQA9 187 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 OR6C2Q9NZP2 312 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 POLG2Q9UHN1 485 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CDYLQ9Y232 598 aa16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 PTRH2Q9Y3E5 179 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SPTAN1Q13813 2472 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CELSR2Q9HCU4 2923 aa16.09■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 UNC79Q9P2D8 2635 aa16.09■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 MASP2O00187 686 aa16.09■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 KRT86O43790 486 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms