RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 RNF111Q6ZNA4 994 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 KBTBD2Q8IY47 623 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 YAF2Q8IY57 180 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 FAM9CQ8IZT9 166 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 DPP10Q8N608 796 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 L3MBTL4Q8NA19 623 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 GLB1L3Q8NCI6 653 aaPredicted RBP12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 ZUFSPQ96AP4 578 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 TMEM159Q96B96 161 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 MRPL38Q96DV4 380 aaKnown RBP12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 ZNF514Q96K75 400 aaPredicted RBP12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 FAM129BQ96TA1 746 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 HDAC8Q9BY41 377 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 PBX4Q9BYU1 374 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 THAP10Q9P2Z0 257 aaPredicted RBP12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 ZNF490Q9ULM2 529 aaPredicted RBP12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 COLQQ9Y215 455 aaPredicted RBP12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 RNF11Q9Y3C5 154 aa12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 POLR3HQ9Y535 204 aaPredicted RBP12.35□□□□□ -0.43
AC055717.2-201ENST00000561864 KCNE1BA0A087WTH5 132 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 TCRBV3S1A0A5B6 114 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 ASPDHA6ND91 283 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 OR2AG2A6NM03 316 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 ARNTLO00327 626 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 ANKRD28O15084 1053 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 UGDHO60701 494 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 DNAJA2O60884 412 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 RECQL5O94762 991 aaPredicted RBP12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 C6P13671 934 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 ACPPP15309 386 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 PRPH2P23942 346 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 SLC6A2P23975 617 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 GNPDA1P46926 289 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 EEFSECP57772 596 aaKnown RBP12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 RPL38P63173 70 aaKnown RBP12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 RHDQ02161 417 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 MESP2Q0VG99 397 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 TMEM115Q12893 351 aaPredicted RBP12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 GTF2H3Q13889 308 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 TLR1Q15399 786 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 TRIP10Q15642 601 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 PTCHD3Q3KNS1 767 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 TIGD2Q4W5G0 525 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 C6orf10Q5SRN2 563 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 CACHD1Q5VU97 1274 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 FAM46CQ5VWP2 391 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 ANKRD54Q6NXT1 300 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 NUDT18Q6ZVK8 323 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 ERN2Q76MJ5 926 aaKnown RBP12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 PDSS2Q86YH6 399 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 SLC22A15Q8IZD6 547 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 FBXO15Q8NCQ5 510 aaPredicted RBP12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 PROKR1Q8TCW9 393 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 N4BP2L2Q92802 583 aaPredicted RBP12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 TEX37Q96LM6 180 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 LRGUKQ96M69 825 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 CCDC138Q96M89 665 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 P2RY13Q9BPV8 354 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 PRO3102Q9H379 93 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 LRTM1Q9HBL6 345 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 RIMS3Q9UJD0 308 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 PCDHA9Q9Y5H5 950 aa12.34□□□□□ -0.43
AC055717.2-201ENST00000561864 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 TBC1D3BA6NDS4 549 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 AQP12BA6NM10 295 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 ARHGEF33A8MVX0 844 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 FFAR3O14843 346 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 GPR42O15529 346 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 VEGFDO43915 354 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 LZTS3O60299 673 aaPredicted RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 RSL1D1O76021 490 aaKnown RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 SOD1P00441 154 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 G6PDP11413 515 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 SLC2A4P14672 509 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 TCN1P20061 433 aaPredicted RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 VARSP26640 1264 aaKnown RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 PEX2P28328 305 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 MAPK1P28482 360 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 IL12AP29459 219 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 SLC7A1P30825 629 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 GJA4P35212 333 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 MSX2P35548 267 aaPredicted RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 GRIA2P42262 883 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 GPR1P46091 355 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 CTSCP53634 463 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 CLNS1AP54105 237 aaKnown RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 PLOD1Q02809 727 aaPredicted RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 PCDH1Q08174 1060 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 ZNF658BQ4V348 819 aaPredicted RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 RFTN2Q52LD8 501 aaPredicted RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 ZNF648Q5T619 568 aaPredicted RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 LCN8Q6JVE9 175 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 TMEM220Q6QAJ8 160 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 DHFR2Q86XF0 187 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 AQP12AQ8IXF9 295 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 SLC15A3Q8IY34 581 aa12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 BEND7Q8N7W2 519 aaPredicted RBP12.33□□□□□ -0.44
AC055717.2-201ENST00000561864 FAM156AQ8NDB6 213 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms