RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 GLB1L3Q8NCI6 653 aaPredicted RBP13.22□□□□□ -0.29
TRAF3-208ENST00000560371 RBM4BQ9BQ04 359 aaKnown RBP13.22□□□□□ -0.29
TRAF3-208ENST00000560371 RBM4Q9BWF3 364 aaKnown RBP13.22□□□□□ -0.29
TRAF3-208ENST00000560371 SMG9Q9H0W8 520 aaKnown RBP13.22□□□□□ -0.29
TRAF3-208ENST00000560371 HS3ST4Q9Y661 456 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 TTC24A2A3L6 582 aaPredicted RBP13.22□□□□□ -0.29
TRAF3-208ENST00000560371 MTMR11A4FU01 709 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 MTX2O75431 263 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 RSL1D1O76021 490 aaKnown RBP13.22□□□□□ -0.29
TRAF3-208ENST00000560371 TGFBR2P37173 567 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 PRAMEF14Q5SWL7 426 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 PRAMEF13Q5VWM6 474 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 FAM110BQ8TC76 370 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 ESAMQ96AP7 390 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 SERPINA1P01009 418 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 VIPR1P32241 457 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 CA9Q16790 459 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 PYDC2Q56P42 97 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 MTX3Q5HYI7 312 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 DRICH1Q6PGQ1 229 aaPredicted RBP13.22□□□□□ -0.29
TRAF3-208ENST00000560371 NCSTNQ92542 709 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 PLGRKTQ9HBL7 147 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 TTC3P53804 2025 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 ADAMDEC1O15204 470 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 CYB5AP00167 134 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 EFNA1P20827 205 aaPredicted RBP13.21□□□□□ -0.29
TRAF3-208ENST00000560371 CDCA2Q69YH5 1023 aaPredicted RBP13.21□□□□□ -0.29
TRAF3-208ENST00000560371 CNTD1Q8N815 330 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 OR2T34Q8NGX1 318 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 OR2T3Q8NH03 318 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 PIGXQ8TBF5 258 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 SLC35G5Q96KT7 338 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 PDCD10Q9BUL8 212 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 CCDC28BQ9BUN5 200 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 NMUR2Q9GZQ4 415 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 PCDHB3Q9Y5E6 796 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 SRRM3A6NNA2 597 aaPredicted RBP13.21□□□□□ -0.29
TRAF3-208ENST00000560371 NDUFS4O43181 175 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 KRT36O76013 467 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 SEC24AO95486 1093 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 IGFBP5P24593 272 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 ULK3Q6PHR2 472 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 PAQR3Q6TCH7 311 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 RNF19BQ6ZMZ0 732 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 GKN2Q86XP6 184 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 SNX33Q8WV41 574 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 BCAS3Q9H6U6 928 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 FNIP2Q9P278 1114 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 ZNF282Q9UDV7 671 aaPredicted RBP13.21□□□□□ -0.29
TRAF3-208ENST00000560371 A0A0G2JN53 185 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 ZNF30P17039 623 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 ARFIP1P53367 373 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 PDK3Q15120 406 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 TTYH3Q9C0H2 523 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 UBE2QL1A1L167 161 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 OR51F1A6NGY5 319 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 TRIM3O75382 744 aaPredicted RBP13.21□□□□□ -0.29
TRAF3-208ENST00000560371 CLDN7O95471 211 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 ATP1B2P14415 290 aaPredicted RBP13.21□□□□□ -0.29
TRAF3-208ENST00000560371 ACVRL1P37023 503 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 NFKB2Q00653 900 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 SLC29A4Q7RTT9 530 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 DEFB119Q8N690 84 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 DENND1AQ8TEH3 1009 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 RFKQ969G6 155 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 RNF31Q96EP0 1072 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 RAPGEFL1Q9UHV5 662 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 GPC6Q9Y625 555 aaPredicted RBP13.21□□□□□ -0.29
TRAF3-208ENST00000560371 DGKBQ9Y6T7 804 aa13.21□□□□□ -0.29
TRAF3-208ENST00000560371 CPSF4LA6NMK7 179 aaKnown RBP13.21□□□□□ -0.3
TRAF3-208ENST00000560371 J3KR12 359 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 TPST2O60704 377 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 UGT2B11O75310 529 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 NME6O75414 186 aaPredicted RBP13.21□□□□□ -0.3
TRAF3-208ENST00000560371 POP7O75817 140 aaKnown RBP13.21□□□□□ -0.3
TRAF3-208ENST00000560371 FABP3P05413 133 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 CBX5P45973 191 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 NCBP2P52298 156 aaKnown RBP eCLIP13.21□□□□□ -0.3
TRAF3-208ENST00000560371 IQCKQ8N0W5 287 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF781Q8N8C0 355 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 GSTCDQ8NEC7 633 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 LMX1AQ8TE12 382 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 COX4I2Q96KJ9 171 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 PIP5K1BO14986 540 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 PRODHO43272 600 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 PCDH7O60245 1069 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 RPS14P62263 151 aaKnown RBP13.21□□□□□ -0.3
TRAF3-208ENST00000560371 SLBPQ14493 270 aaKnown RBP eCLIP13.21□□□□□ -0.3
TRAF3-208ENST00000560371 ZCCHC12Q6PEW1 402 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 OR10A6Q8NH74 314 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 PHF11Q9UIL8 331 aa13.21□□□□□ -0.3
TRAF3-208ENST00000560371 PSMD11O00231 422 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 ZBTB22O15209 634 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 SCRN3Q0VDG4 424 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 TRMT10BQ6PF06 316 aaKnown RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 SLC35F5Q8WV83 523 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 IL1RAPQ9NPH3 570 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 PNPLA3Q9NST1 481 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 DUXAA6NLW8 204 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 CASKO14936 926 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms