RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 ARNTP27540 789 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 PTPN4P29074 926 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 BASP1P80723 227 aaKnown RBP17.15■□□□□ 0.34
HDDC3-205ENST00000559898 GRB7Q14451 532 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 IGFBP7Q16270 282 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 TMTC4Q5T4D3 741 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 TTC27Q6P3X3 843 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 FAM198BQ6UWH4 519 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 MPP5Q8N3R9 675 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 PRELID2Q8N945 189 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 MS4A14Q96JA4 679 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 MENTQ9BUN1 341 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 SPRTNQ9H040 489 aaPredicted RBP17.15■□□□□ 0.34
HDDC3-205ENST00000559898 TREX1Q9NSU2 369 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 TUBD1Q9UJT1 453 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 KCND3Q9UK17 655 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 TLK1Q9UKI8 766 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 RIMKLBQ9ULI2 386 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 RUVBL2Q9Y230 463 aaKnown RBP17.15■□□□□ 0.34
HDDC3-205ENST00000559898 DRG1Q9Y295 367 aaKnown RBP17.15■□□□□ 0.34
HDDC3-205ENST00000559898 PCDHB3Q9Y5E6 796 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 ASH1LQ9NR48 2969 aaKnown RBP17.14■□□□□ 0.33
HDDC3-205ENST00000559898 C2orf74A8MZ97 194 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 MEN1O00255 615 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 AVILO75366 819 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 CCDC175P0C221 793 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 OR56A5P0C7T3 313 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 VPS41P49754 854 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 HSPA14Q0VDF9 509 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 CCSMST1Q4G0I0 132 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 SYTL3Q4VX76 610 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 FASTKD1Q53R41 847 aaKnown RBP17.14■□□□□ 0.33
HDDC3-205ENST00000559898 ANKRD22Q5VYY1 191 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 DRICH1Q6PGQ1 229 aaPredicted RBP17.14■□□□□ 0.33
HDDC3-205ENST00000559898 ZNF662Q6ZS27 426 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 TAX1BP1Q86VP1 789 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 TBC1D21Q8IYX1 336 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 ENDOVQ8N8Q3 282 aaKnown RBP17.14■□□□□ 0.33
HDDC3-205ENST00000559898 LINC01555Q8NAE3 123 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 PPHLN1Q8NEY8 458 aaKnown RBP17.14■□□□□ 0.33
HDDC3-205ENST00000559898 OR5K2Q8NHB8 316 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 CFAP61Q8NHU2 1237 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 MFSD3Q96ES6 412 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 AP1M1Q9BXS5 423 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 LATS2Q9NRM7 1088 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 CATSPERZQ9NTU4 200 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 IL1RAPL1Q9NZN1 696 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 TSR3Q9UJK0 312 aaKnown RBP17.14■□□□□ 0.33
HDDC3-205ENST00000559898 POLHQ9Y253 713 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 FARSAQ9Y285 508 aaKnown RBP17.14■□□□□ 0.33
HDDC3-205ENST00000559898 PPP2R2CQ9Y2T4 447 aa17.14■□□□□ 0.33
HDDC3-205ENST00000559898 GOLGA6L6A8MZA4 724 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 C21orf140B9A014 251 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 CD3EAPO15446 510 aaKnown RBP17.13■□□□□ 0.33
HDDC3-205ENST00000559898 ZNF749O43361 778 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 GPC4O75487 556 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 CBSLP0DN79 551 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 CBSP35520 551 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 PRAMEP78395 509 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 KCNC4Q03721 635 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 PCID2Q5JVF3 399 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 CTSL3PQ5NE16 218 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 ZNF385CQ66K41 422 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-205ENST00000559898 BPHLQ86WA6 291 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-205ENST00000559898 SLC22A15Q8IZD6 547 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 CARFQ8N187 725 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 C19orf47Q8N9M1 422 aaKnown RBP17.13■□□□□ 0.33
HDDC3-205ENST00000559898 ADAMTS17Q8TE56 1095 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 CLIP3Q96DZ5 547 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 P2RY12Q9H244 342 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 CLMPQ9H6B4 373 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 ACTR5Q9H9F9 607 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-205ENST00000559898 GALPQ9UBC7 116 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 MAN2B2Q9Y2E5 1009 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 NFS1Q9Y697 457 aa17.13■□□□□ 0.33
HDDC3-205ENST00000559898 SPTA1P02549 2419 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 UBR5O95071 2799 aaPredicted RBP17.12■□□□□ 0.33
HDDC3-205ENST00000559898 RELNP78509 3460 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 ARGFXA6NJG6 315 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 MASP2O00187 686 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 GAS8O95995 478 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 GSTM1P09488 218 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 AOAHP28039 575 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 PKLRP30613 574 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 PTGIRP43119 386 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 PMS2P54278 862 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 GSTM4Q03013 218 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 UGT8Q16880 541 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 LACTB2Q53H82 288 aaPredicted RBP17.12■□□□□ 0.33
HDDC3-205ENST00000559898 C1orf189Q5VU69 101 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 LYPLAL1Q5VWZ2 237 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 CYB5D1Q6P9G0 228 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 ZNF449Q6P9G9 518 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 GSTA5Q7RTV2 222 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 SYTL1Q8IYJ3 562 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.12■□□□□ 0.33
HDDC3-205ENST00000559898 FAM136AQ96C01 138 aa17.12■□□□□ 0.33
HDDC3-205ENST00000559898 EIF2B3Q9NR50 452 aaKnown RBP17.12■□□□□ 0.33
HDDC3-205ENST00000559898 SEC16AO15027 2179 aa17.11■□□□□ 0.33
HDDC3-205ENST00000559898 ISM1B1AKI9 464 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms