RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MED16Q9Y2X0 877 aa12□□□□□ -0.49
SMAD3-205ENST00000558428 DHRS7Q9Y394 339 aa12□□□□□ -0.49
SMAD3-205ENST00000558428 PSAT1Q9Y617 370 aa12□□□□□ -0.49
SMAD3-205ENST00000558428 PCM1Q15154 2024 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 LAMA5O15230 3695 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 GSAPA4D1B5 854 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 EFCAB7A8K855 629 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 MATN2O00339 956 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 BTN3A3O00478 584 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 BTN3A1O00481 513 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 TOX3O15405 576 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-205ENST00000558428 PIAS1O75925 651 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 ANKRD34CP0C6C1 535 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 FGF3P11487 239 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-205ENST00000558428 SHMT2P34897 504 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 MLLT3P42568 568 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-205ENST00000558428 BDKRB1P46663 353 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 GPX6P59796 221 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 ERVPABLB-1P60509 514 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 TBC1D25Q3MII6 688 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 FAM45BPQ6NSW5 357 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 TTC23LQ6PF05 361 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 STRA8Q7Z7C7 330 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 SLC26A11Q86WA9 606 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 SPNS2Q8IVW8 549 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 FAM45AQ8TCE6 357 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 CDKL2Q92772 493 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 ZNF578Q96N58 590 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-205ENST00000558428 CD180Q99467 661 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 MAP3K3Q99759 626 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 ZNF768Q9H5H4 540 aaKnown RBP11.99□□□□□ -0.49
SMAD3-205ENST00000558428 OCIAD1Q9NX40 245 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 NSMCE4AQ9NXX6 385 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 KLHL42Q9P2K6 505 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 CIDEBQ9UHD4 219 aa11.99□□□□□ -0.49
SMAD3-205ENST00000558428 CORO1CQ9ULV4 474 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-205ENST00000558428 ANKRD11Q6UB99 2663 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-205ENST00000558428 TCRBV9S1A1TA0A576 114 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 PIPSLA2A3N6 862 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 TLCD2A6NGC4 264 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 CDRT15L2A8MXV6 281 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 C2orf74A8MZ97 194 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 TLX3O43711 291 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-205ENST00000558428 ZNF500O60304 480 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-205ENST00000558428 MATN4O95460 622 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 C1orf105O95561 183 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 RHOXF2BP0C7M4 288 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 TPBGLP0DKB5 382 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 CBSLP0DN79 551 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 ENO3P13929 434 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-205ENST00000558428 CDH3P22223 829 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 MCM3P25205 808 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 CBSP35520 551 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 CCNFP41002 786 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 SKIV2L2P42285 1042 aaKnown RBP11.98□□□□□ -0.49
SMAD3-205ENST00000558428 KPNA2P52292 529 aaKnown RBP11.98□□□□□ -0.49
SMAD3-205ENST00000558428 CDKN2DP55273 166 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 TIAL1Q01085 375 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMAD3-205ENST00000558428 KYNUQ16719 465 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 ST3GAL2Q16842 350 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 HECTD2Q5U5R9 776 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 CEP128Q6ZU80 1094 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 NEK10Q6ZWH5 1172 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 CYS1Q717R9 158 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 PROSER1Q86XN7 944 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 CPNE9Q8IYJ1 553 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 ADGRF3Q8IZF5 1079 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 LRRN4CLQ8ND94 238 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 MAGEC3Q8TD91 643 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 UBXN4Q92575 508 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 FGF11Q92914 225 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 USP7Q93009 1102 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 RAD51AP1Q96B01 352 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 ELMO2Q96JJ3 720 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 FMO2Q99518 471 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 RHOXF2Q9BQY4 288 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 L2HGDHQ9H9P8 463 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 LRRC4CQ9HCJ2 640 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 SMYD2Q9NRG4 433 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 OR6C2Q9NZP2 312 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 TXNDC16Q9P2K2 825 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 POMT2Q9UKY4 750 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 SLC39A10Q9ULF5 831 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 ZMIZ1Q9ULJ6 1067 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 VWA7Q9Y334 891 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 SPTBP11277 2137 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 ADAMTS20P59510 1910 aa11.98□□□□□ -0.49
SMAD3-205ENST00000558428 IGHV5-51A0A0C4DH38 117 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 FAM95CA0A1B0GW59 222 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 FAM159BA6NKW6 160 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 CXorf49A8MYA2 514 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-205ENST00000558428 B4E171 279 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 TAF4O00268 1085 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 EIF3FO00303 357 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-205ENST00000558428 RASGRF2O14827 1237 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 PRAMEF10O60809 474 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 SPAG6O75602 509 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 CATP04040 527 aaKnown RBP11.97□□□□□ -0.49
SMAD3-205ENST00000558428 CHRM5P08912 532 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-205ENST00000558428 MPC1LP0DKB6 136 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms