RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 LRRC10BA6NIK2 292 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 KCNK1O00180 336 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 BTN3A3O00478 584 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 BTN3A1O00481 513 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 SOCS6O14544 535 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 AURKAO14965 403 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 FANCGO15287 622 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 ZSCAN9O15535 394 aaPredicted RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 CNOT3O75175 753 aaKnown RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 PMPCBO75439 489 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 KLHL18O94889 574 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 RASAL1O95294 804 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 ONECUT2O95948 504 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 MT-CYBP00156 380 aaPredicted RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 EPOP01588 193 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 CD48P09326 243 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 RALBP11234 206 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 PVRP15151 417 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 TCF4P15884 667 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 AKT1P31749 480 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 CD151P48509 253 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 CARSP49589 748 aaKnown RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 ARSEP51690 589 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 ART1P52961 327 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 KRTAP10-9P60411 292 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 IFI35P80217 286 aaPredicted RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 SLC25A11Q02978 314 aaKnown RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 TLE4Q04727 773 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 PPIDQ08752 370 aaKnown RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 AP1B1Q10567 949 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 SLC10A2Q12908 348 aaPredicted RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 DPYSL3Q14195 570 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 SLC9A5Q14940 896 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 RBBP7Q16576 425 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 ATP13A4Q4VNC1 1196 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 GPRC6AQ5T6X5 926 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 CDKAL1Q5VV42 579 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 FAAH2Q6GMR7 532 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 DUS1LQ6P1R4 473 aaKnown RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 KIRREL2Q6UWL6 708 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 FAM151BQ6UXP7 276 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 DET1Q7L5Y6 550 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 KBTBD2Q8IY47 623 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 CNTD1Q8N815 330 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 NIPA2Q8N8Q9 360 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 DDHD1Q8NEL9 900 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 SUN3Q8TAQ9 357 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 CCDC110Q8TBZ0 833 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 LRRN4Q8WUT4 740 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 HEXDCQ8WVB3 486 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 FKBP10Q96AY3 582 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 DCUN1D1Q96GG9 259 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 RBM41Q96IZ5 413 aaKnown RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 LINC00615Q96LM1 132 aaPredicted RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 ERGIC2Q96RQ1 377 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 TRIM56Q9BRZ2 755 aaKnown RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 ZNF670Q9BS34 389 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 SYT11Q9BT88 431 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 MAK16Q9BXY0 300 aaKnown RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 KLHL25Q9H0H3 589 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.99□□□□□ -1.61
SPG11-208ENST00000558155 HAUS4Q9H6D7 363 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 MVB12BQ9H7P6 319 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 WDR54Q9H977 334 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 GPAMQ9HCL2 828 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 FAM60AQ9NP50 221 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 SEMA3GQ9NS98 782 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 IL1RAPL1Q9NZN1 696 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 IL17CQ9P0M4 197 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 ABI3Q9P2A4 366 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 DHCR7Q9UBM7 475 aaKnown RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 FAM8A1Q9UBU6 413 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 LIMA1Q9UHB6 759 aaKnown RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 SH3BGRL2Q9UJC5 107 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 PLCL2Q9UPR0 1127 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 MRPS2Q9Y399 296 aaKnown RBP4.99□□□□□ -1.61
SPG11-208ENST00000558155 NEU2Q9Y3R4 380 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 PKP3Q9Y446 797 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 PCM1Q15154 2024 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 GTF3C1Q12789 2109 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 LRBAP50851 2863 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 NUP210LQ5VU65 1888 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 LOC285095A0A1B0GVY8 99 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 FAM221AA4D161 298 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 LGALS16A8MUM7 142 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 H3BMH7 237 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 C19orf84I3L1E1 186 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 STX7O15400 261 aaKnown RBP4.98□□□□□ -1.61
SPG11-208ENST00000558155 KDM1AO60341 852 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 ALOX12BO75342 701 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 USP1O94782 785 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 MLYCDO95822 493 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 HPP00738 406 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 CD46P15529 392 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 HOXB4P17483 251 aaPredicted RBP4.98□□□□□ -1.61
SPG11-208ENST00000558155 FDXRP22570 491 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 KIR3DL1P43629 444 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 TNFSF10P50591 281 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 ADORA2A-AS1P86434 159 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 GBE1Q04446 702 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms