RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 C1orf50Q9BV19 199 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 BPIFA1Q9NP55 256 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 MID1IP1Q9NPA3 183 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 NSMCE4AQ9NXX6 385 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 NDUFAF1Q9Y375 327 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 FAM32AQ9Y421 112 aaKnown RBP9.73□□□□□ -0.85
PRKCH-211ENST00000555082 DOCK8Q8NF50 2099 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 TRIM64A6NGJ6 449 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 PTGES3LE9PB15 166 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 AQP9O43315 295 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 CNOT3O75175 753 aaKnown RBP9.73□□□□□ -0.85
PRKCH-211ENST00000555082 LDLRP01130 860 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 LTA4HP09960 611 aaKnown RBP9.73□□□□□ -0.85
PRKCH-211ENST00000555082 TTKP33981 857 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 DGKGP49619 791 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 PLA2G16P53816 162 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 TPD52P55327 224 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-211ENST00000555082 LIPEQ05469 1076 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 UNC50Q53HI1 259 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 INO80DQ53TQ3 878 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-211ENST00000555082 AGAP9Q5VTM2 703 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 CES5AQ6NT32 575 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 ZNF773Q6PK81 442 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 DPY19L3Q6ZPD9 716 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 DSG4Q86SJ6 1040 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 ZSWIM9Q86XI8 627 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 CADM3Q8N126 398 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 PPHLN1Q8NEY8 458 aaKnown RBP9.73□□□□□ -0.85
PRKCH-211ENST00000555082 MDGA1Q8NFP4 955 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 VOPP1Q96AW1 172 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 FEM1CQ96JP0 617 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 TEX37Q96LM6 180 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 ALPK1Q96QP1 1244 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 KCTD14Q9BQ13 255 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-211ENST00000555082 CCDC90BQ9GZT6 254 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 CCDC68Q9H2F9 335 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 ACTR3BQ9P1U1 418 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 ANAPC2Q9UJX6 822 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 PSME2Q9UL46 239 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 DNAJC15Q9Y5T4 150 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 GPC6Q9Y625 555 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-211ENST00000555082 VCANP13611 3396 aa9.73□□□□□ -0.85
PRKCH-211ENST00000555082 A0A087X1B8 175 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 A0A1B0GTL3 188 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 WASH3PC4AMC7 463 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 H0Y858 1186 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 GPR39O43194 453 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 LDB2O43679 373 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 NDST3O95803 873 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 CISD3P0C7P0 127 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 HLA-EP13747 358 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 HGFP14210 728 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 TCF3P15923 654 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 PAGE3Q5JUK9 113 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 SLC2A7Q6PXP3 512 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 TMEM207Q6UWW9 146 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 Q7L0L9 218 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 R3HCC1LQ7Z5L2 792 aaKnown RBP9.72□□□□□ -0.85
PRKCH-211ENST00000555082 STK32CQ86UX6 486 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 RAVER1Q8IY67 606 aaKnown RBP9.72□□□□□ -0.85
PRKCH-211ENST00000555082 CLEC4FQ8N1N0 589 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 MIER2Q8N344 545 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 OR13J1Q8NGT2 312 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 ROPN1LQ96C74 230 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 BIRC7Q96CA5 298 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 TBATAQ96M53 351 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 CHID1Q9BWS9 393 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 ARNT2Q9HBZ2 717 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 GIN1Q9NXP7 522 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 GDE1Q9NZC3 331 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 CRYL1Q9Y2S2 319 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 TIMM22Q9Y584 194 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 SLC9A3R1O14745 358 aaPredicted RBP9.72□□□□□ -0.85
PRKCH-211ENST00000555082 E2F6O75461 281 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 LAMP2P13473 410 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 GDI1P31150 447 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 HPCAL1P37235 193 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 ADARB1P78563 741 aaKnown RBP9.72□□□□□ -0.85
PRKCH-211ENST00000555082 IFITM3Q01628 133 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 MEP1AQ16819 746 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 XAF1Q6GPH4 301 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 LCN8Q6JVE9 175 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 C22orf39Q6P5X5 142 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 CRTC3Q6UUV7 619 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 HS3ST5Q8IZT8 346 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 SFRP1Q8N474 314 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 OR6P1Q8NGX9 317 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 CHFRQ96EP1 664 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 ZDHHC6Q9H6R6 413 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 SMURF2Q9HAU4 748 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 CD320Q9NPF0 282 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.72□□□□□ -0.85
PRKCH-211ENST00000555082 KPNA4O00629 521 aaPredicted RBP9.72□□□□□ -0.85
PRKCH-211ENST00000555082 NOBOXO60393 691 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 BCAS1O75363 584 aaPredicted RBP9.72□□□□□ -0.85
PRKCH-211ENST00000555082 PAPLNO95428 1278 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 POLR2EP19388 210 aaKnown RBP9.72□□□□□ -0.85
PRKCH-211ENST00000555082 CDKN2DP55273 166 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 OR4D2P58180 307 aa9.72□□□□□ -0.85
PRKCH-211ENST00000555082 BROXQ5VW32 411 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms