RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 GDAP1Q8TB36 358 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 HDAC10Q969S8 669 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 RMND5BQ96G75 393 aaPredicted RBP11.26□□□□□ -0.61
SNRPF-205ENST00000553192 GPATCH1Q9BRR8 931 aaKnown RBP11.26□□□□□ -0.61
SNRPF-205ENST00000553192 TUBGCP2Q9BSJ2 902 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 CHRNA10Q9GZZ6 450 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 CLEC4MQ9H2X3 399 aaPredicted RBP11.26□□□□□ -0.61
SNRPF-205ENST00000553192 ACTR10Q9NZ32 417 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 IL17CQ9P0M4 197 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 L3MBTL1Q9Y468 752 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 DNMT3AQ9Y6K1 912 aaPredicted RBP11.26□□□□□ -0.61
SNRPF-205ENST00000553192 HRNRQ86YZ3 2850 aaPredicted RBP11.26□□□□□ -0.61
SNRPF-205ENST00000553192 HIVEP2P31629 2446 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 A0A1B0GX78 115 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 ASPDHA6ND91 283 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 AURKAO14965 403 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 KLK8O60259 260 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 BMP10O95393 424 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 FGFR1OPO95684 399 aaKnown RBP11.25□□□□□ -0.61
SNRPF-205ENST00000553192 MT-CYBP00156 380 aaPredicted RBP11.25□□□□□ -0.61
SNRPF-205ENST00000553192 HLA-DQB2P05538 268 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 TPOP07202 933 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 COX6A1P12074 109 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 ACPPP15309 386 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 CA4P22748 312 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 CES1P23141 567 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 DLX5P56178 289 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 ALDH6A1Q02252 535 aaKnown RBP11.25□□□□□ -0.61
SNRPF-205ENST00000553192 DEFB113Q30KQ7 82 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 ATP13A4Q4VNC1 1196 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 ZNF766Q5HY98 468 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 SPESP1Q6UW49 350 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 TTLL10Q6ZVT0 673 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 POLNQ7Z5Q5 900 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 CDC20BQ86Y33 519 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 CIARTQ8N365 385 aaPredicted RBP11.25□□□□□ -0.61
SNRPF-205ENST00000553192 DTWD1Q8N5C7 304 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 ACRBPQ8NEB7 543 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 FLVCR1-AS1Q8TAF5 88 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 SUN3Q8TAQ9 357 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 BRSK1Q8TDC3 778 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 NAT14Q8WUY8 206 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 TRIB3Q96RU7 358 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 HES7Q9BYE0 225 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 XKR8Q9H6D3 395 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 ZWILCHQ9H900 591 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 KCNJ16Q9NPI9 418 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 RASSF1Q9NS23 344 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 RAD18Q9NS91 495 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 FANCLQ9NW38 375 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 RBM22Q9NW64 420 aaKnown RBP eCLIP11.25□□□□□ -0.61
SNRPF-205ENST00000553192 NXT1Q9UKK6 140 aaKnown RBP11.25□□□□□ -0.61
SNRPF-205ENST00000553192 ZNF711Q9Y462 761 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 TTLL3Q9Y4R7 772 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 COLEC10Q9Y6Z7 277 aa11.25□□□□□ -0.61
SNRPF-205ENST00000553192 FAM237BA0A1B0GVD1 139 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 ANKRD62A6NC57 917 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 MGAT4DA6NG13 374 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 FAM171A2A8MVW0 826 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 C2orf74A8MZ97 194 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 BIN1O00499 593 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 MAP2K7O14733 419 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 UGT1A9O60656 530 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 ATE1O95260 518 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 TSPAN12O95859 305 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 UGT1A6P19224 532 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 UGT1A1P22309 533 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 FDXRP22570 491 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 PSMA2P25787 234 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 CHRNB4P30926 498 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 MTIF2P46199 727 aaKnown RBP11.24□□□□□ -0.61
SNRPF-205ENST00000553192 ZNF135P52742 658 aaPredicted RBP11.24□□□□□ -0.61
SNRPF-205ENST00000553192 FAM182AQ5T1J6 154 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 DCUN1D2Q6PH85 259 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 PAMR1Q6UXH9 720 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 CHSY3Q70JA7 882 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 PSTKQ8IV42 348 aaKnown RBP11.24□□□□□ -0.61
SNRPF-205ENST00000553192 ZZZ3Q8IYH5 903 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 OR52E1Q8NGJ3 308 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 LRRN4Q8WUT4 740 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 ASB5Q8WWX0 329 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 VPS50Q96JG6 964 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 COX4I2Q96KJ9 171 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 FRMD6Q96NE9 622 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 TTC25Q96NG3 672 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 CSPG4P5Q96PW8 444 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 CRB3Q9BUF7 120 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 TRIM7Q9C029 511 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 NDST4Q9H3R1 872 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 TFB2MQ9H5Q4 396 aaKnown RBP11.24□□□□□ -0.61
SNRPF-205ENST00000553192 ZNF395Q9H8N7 513 aaPredicted RBP11.24□□□□□ -0.61
SNRPF-205ENST00000553192 UGT1A7Q9HAW7 530 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 UGT1A10Q9HAW8 530 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 UGT1A8Q9HAW9 530 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 MAGEE1Q9HCI5 957 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 BPIFA1Q9NP55 256 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 SEPT11Q9NVA2 429 aaKnown RBP11.24□□□□□ -0.61
SNRPF-205ENST00000553192 ACSL5Q9ULC5 683 aa11.24□□□□□ -0.61
SNRPF-205ENST00000553192 NSG1A0A0A6YYJ2 146 aa11.23□□□□□ -0.61
SNRPF-205ENST00000553192 RNF212BA8MTL3 300 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms